Rhododendron vialii: 131331395
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Entry
131331395 CDS
T09330
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131331395
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131331395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
TRM82_WD
Beta-prop_VPS8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR41
TPR_2
TPR_1
TPR_14
Motif
Other DBs
NCBI-GeneID:
131331395
NCBI-ProteinID:
XP_058221300
LinkDB
All DBs
Position
6a:10806183..10833426
Genome browser
AA seq
760 aa
AA seq
DB search
MESVGFHDGNITDLIDKRTLHVRHDIRPSLEMHSSLIQRLSQERELEGHVGCVNAVAWNS
KGSLLISGSDDTRVNIYSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRLRGKGPDESDISPSAVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREA
SSCPPAGSAHQECRNVLLDLRCGAKRSLADPPKQPLALKSCDISSVRPHLLLVGGSDAFA
RLYDRRMLPPLSSCRKKLSPPSCVNYFCPMHLSDRGRSSLHLTHVTFSPNGEEVLLSYSG
EHVYLMDVAGGSAMQYTPADASKLMTFTPLLNGVELQSSKTGVLRNGFPLKSNFSATLDK
CRKLVQIAEKSLLENTDYYYGIEACNDVLDCHGREIGPMLMHECLCIRAALLLKRKWKND
AFMALRDCHRARRINASSFRPLHIQSEALFQLGKHKEALEYAMAAHSMAPSDSEVAETLE
HIKKHLAAAEDEKNSKANDGAPKSEPRAGRALSLSDILYRSEANSDASQDGPRSDREDSD
YEEELELDFETSGSGDEGRDVEANVLHGSLNLRIHRRGDSAMETGRANGSCKSPTSSQND
KTTYLPEAAIDMKQRYVGHCNVGTDIKQASFLGQRGEYVASGSDDGKWFIWEKKTGRLIK
ILVGDDAVVNCVQCHPVDCVVATSGIDNTIKIWSPTSPVSSIMAAGAAGPETNNVVDVME
SNQRTLCRNREMILPFELLERFRMHEFSEGTLHPFECAQS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtcggctttcacgacggcaacatcaccgacttgatcgataagcgaactctc
cacgtccgccacgacattaggcccagtttagaaatgcactcttcgttgatacaaaggctt
tcccaggaaagagaattggaggggcatgtgggttgtgtaaatgctgtggcttggaactca
aaaggctcactcttgatatctggatctgatgatactagggtcaacatttatagctattca
agccgaaagcttttgcactctattgagactgggcattcggccaacatattctgtacaaaa
tttgttcctgaaacttctgatgaattagtggtctctggtgctggtgatgctgaagttcga
ctttttaatctgtctcgtctaaggggtaaaggacctgatgaatctgatattagtccgtca
gcagtatttcagtgccatagtagaagagtgaaaaaattagctgtggaagtaggaaatcct
aatgttgtttggagtgcaagtgaagatgggactttgaggcagcatgattttcgggaggct
tcatcttgccctccagctggatcggctcatcaagaatgtcgcaatgttttacttgatttg
cgatgtggagcgaagaggtcattagctgatcctcctaagcagccgctggctctgaaatct
tgtgatataagttctgttaggcctcatttgcttcttgtcggtgggagtgatgcttttgct
cgtttatatgatagacggatgctgccaccgctctcatcttgtcggaagaagctatcacca
ccttcttgtgttaactatttctgcccgatgcatctttctgatcgtggtcgttctagcttg
cacctgactcatgttacttttagcccaaatggagaagaggttcttcttagttatagtgga
gaacatgtttatctaatggatgtagctggtggcagtgccatgcaatatacgcctgctgat
gcttcgaaactcatgacctttactccactactaaatggagtagaactgcagtcatcaaaa
actggtgtcttacgaaatggtttccctttaaaaagcaatttctctgccacgcttgacaag
tgcagaaaattggttcaaattgcggaaaaatcgttattagagaatacggattattattat
ggaattgaggcttgcaatgacgttttggattgtcatggtcgtgagattggacctatgcta
atgcatgagtgtctatgtatccgtgcagccttgttactcaagcggaagtggaagaatgac
gcttttatggctctaagagattgccaccgagctaggaggattaatgcttcttcatttagg
ccacttcatatacagtctgaagctttattccagctagggaaacataaagaagctttagaa
tatgctatggctgctcattcaatggcaccatcagattctgaagttgcagaaactttggag
cacataaaaaagcatctcgctgcagctgaagatgaaaaaaatagtaaagcaaatgatgga
gcacctaagtctgaaccacgagctggaagagcgttatcattgagtgacatactctaccgg
tcagaggctaatagtgatgcttcacaagatggtccgaggtctgatagagaagattctgat
tatgaagaagaactggagttggattttgaaacatcaggatcaggtgatgaagggcgtgac
gttgaagccaatgttcttcatggaagtttgaatttaagaatccacagaagaggtgattct
gctatggagactggtcgtgcaaatggctcttgtaaatcgcctacatcatctcaaaatgac
aaaacaacttatctgcctgaggctgcaatagacatgaagcagagatatgttggccactgt
aatgtggggactgacataaaacaagctagtttccttggccaaagaggtgaatatgttgct
agtggaagcgatgatggaaaatggtttatttgggaaaagaaaactggtagactaataaag
attcttgttggtgatgacgctgttgttaactgtgtgcagtgccatccagttgattgtgtt
gtagctaccagtggtattgataatacaataaaaatttggtctccaacttctccagtctca
tcaattatggctgctggagctgctggaccagagactaataatgtggtggacgtgatggag
agcaatcaacgaacactatgccgtaatcgtgagatgatcttgccctttgaacttttggag
cggttccggatgcatgagttttctgaaggaaccctacatccatttgaatgcgcacaaagt
taa
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