Rhododendron vialii: 131331471
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Entry
131331471 CDS
T09330
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131331471
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
131331471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
NBCH_WD40
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_VPS8
PQQ
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
131331471
NCBI-ProteinID:
XP_058221415
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All DBs
Position
6a:complement(37196626..37197852)
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AA seq
407 aa
AA seq
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MASLSQEIVLASSPDGTITAFDASSGTALGHFTGSQSPRKGLTVIGTNLIAAAHVSPDTA
SGSIHLYNWWSPTPSHHLPVSEPVGPLAATFDGFFLFAGGISGQNHALSLPSGDLIQTFS
AHNNKPVSCLKINDDGSLLFSGGDDGTIAVFPIFKLLDISSDKSNEVVMHRFIGHESAVT
SITAGIGRSNSTIISCSLDCTCKFWNLAHGAPLCTITFPCMIWGVEMDSMESEFFVAGSD
GFLYSGALKGGNRNMVKQGQKLVKWEQKHYGAVVGLAMTNGRRNLVTASENGSIWIWDAE
RKEVVRVLGGEMGSISELVVAKGFGLGDGNSEVNGWSSEFSSREVSRPVREVMEMEKVLG
VLEEDRSKAIDTLGSAIEAHEKLLGLILKEAKMGSNCENSDEEEDDI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactttcacaggaaatcgtcctcgctagctctccagatggcaccattaccgcc
tttgatgcttcctccggcactgctttgggtcacttcactggtagccaatcaccacgaaaa
ggcctaactgtcattggaaccaacctcatcgccgctgctcatgtttcccctgacactgct
tcaggctccattcatctctacaactggtggtctccaacaccctcccaccacctccctgta
tctgagccggtgggtccacttgccgccacttttgacggctttttcctgtttgccggtggc
atttcaggccaaaaccatgcactatcactcccttcaggtgatctaatccaaacattctct
gctcacaacaacaaacccgtatcttgtcttaaaatcaacgatgatggttcgcttctgttc
tccggaggtgatgatggaaccattgcagtttttccaatctttaaactcctagatatttca
tctgacaagtcaaacgaagttgtaatgcatcgcttcattgggcatgaatctgcggtcact
tctatcacggcaggaattggaagatccaatagcactatcatttcttgctccttagactgc
acttgtaagttctggaacctcgcgcacggggcccccctgtgtacgattacattcccgtgt
atgatttggggggtggaaatggattccatggaatccgaattctttgttgccggatcagac
ggttttttgtacagtggagcactaaagggaggaaacagaaacatggtaaaacaagggcag
aaattagtcaaatgggagcagaaacattatggagcagtcgtgggcttggcaatgacgaat
gggcgacgaaatctggtcactgcttcggaaaatggaagcatttggatttgggatgcagag
agaaaagaggtggttagggttcttggtggagaaatgggaagcattagtgaacttgtcgtc
gcgaaaggttttggattaggcgatggtaacagtgaagttaatggatggagttcggagttt
tccagtagagaagtgagtaggccagtaagggaggtgatggagatggaaaaggtgttgggt
gtattggaagaggataggagcaaagccattgatacacttggatcagcaattgaagctcat
gagaaattattgggacttattctcaaagaagccaaaatgggaagtaattgtgaaaacagt
gatgaagaggaagatgacatttga
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