Rhododendron vialii: 131331752
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Entry
131331752 CDS
T09330
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131331752
Membrane trafficking [BR:
rvl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131331752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
131331752
NCBI-ProteinID:
XP_058221636
LinkDB
All DBs
Position
7a:complement(3414107..3423593)
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AA seq
1356 aa
AA seq
DB search
MEDQMGEDFFDKLVDDDSNGFAGCGPSFIEHEVTEEVKAFSNLCIGDNVNSGDNGERESG
GGVVSKSLDGHRDIVTAEGSVLVAPDNVVQSSDAALEAIGELDMQKSRNGGTGVKEVDWS
SFNSASNSRFGSYSDFLNEVGVSSGDLDRKDVVSVSEDMPCGFRSSTVNHEEGGRYYGSQ
TEKAIDGQDLNSSQNWENLYPGWRYNPSTGQWHEIEGYGVTVSTQDNLYTSSTSAGDNAV
TEQRSDAYCFHQPVAEYGMANVSNWNQCSQQKVEEYPAYMVFDPQYPGWYYDTIAQEWRL
FESYKGVMTQPTNVSHNQQSQDSGSSTVHLLPAENHSIHQNFGQIGKFESQGLSIQGQVS
ASDYNWQNRSTWQTASLPNSGVIEIIDNQVSHNPCTQTYRASNSADQQMWLPEQTSHRIG
SAISISDQTCIPGVIFSEHSNQHKPEPSSPSPQVHVSPFYFGSQKSPDFSQPLQHCSQFP
NASSEGRSPAGRPPHALVTFGFGGKLIVMKDNSSLTNSACGSKDSADGIISVLNLMDVVM
DKTVASSIGLGACDYFHALCQQSFPGPLVGGNVGSREVNKWVDEKIASCKSPDMEYRRGE
LLRLLFSLLKIGCQYRGKLRSPCGTDQALKESDCPELAVAQLFASAKRNVGPYGAFSRCL
QNFPSEGEIQATAFEVQKLLISGRIKEALLCAQEGHLWGPALALAAQLGDKFYSDTVKQM
ALCQLVVGSPLRTVCLLIAGQPADVFSNGMCTSSLPGVVNGSQHSSQVCNGASCTLDNWE
ENLAIITANRTKDDELVIIHFGDCLLKERGEILVAHICYLVAEANFESYSGSARVCLIGA
DHWNFPRTYASPEAIQRTELYEYSKVLGNSQFIVPPCQPYKLIYAHMLAEVGKVSDSLKY
CQAILKCLKTCRSPEVDAWKILVLSLEERIKIHQQGGYSSNLAPAKLVGKLLNLFDSTSN
RVVGGLPPPVPSTSHASSQRNEHDCQKVGPRVSNSQSTMAMSSLVPSASTEPISEWQGGS
NRSRHNRSISEPDFGKSPIKDGGSPDMKGNTPGTGGSSRFGLFRTNLFQKTMGLVLRSRS
DRQAKLGETNRFYYDEKLKRWVEEGAETPSEEVTLPPPPRNAAFQNRMPDNTLKDGPNLD
RLHSNDGSDHENQSPLELNLGNQPIPPSSDQFSARGRMGIRARYVDTFHKDGAAPPNLFR
SPSLPAGKPGVGPNTKFFIPTPRALGDETVQTTEDLQEAAVNNKSPSTSDESNPFSSPPT
STSSTTTMHRVPSMDNIARSRTGALGNDKGSLPPHSRRTVSWSGSFCDPSNPSNGTEFKP
LGEVMPQPLLMPGNSSSMQVSMNSRNLGNDLHEVEL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaaatgggcgaggactttttcgataaattggttgacgacgatagtaatggt
ttcgctggatgtggccctagttttatagaacacgaagtgaccgaagaggtgaaagcattt
tcaaacttatgtataggtgacaatgtcaatagtggggacaatggcgaaagggagtctggt
ggtggggttgtgtcaaaatccttggatggtcatcgggacattgtgactgctgagggaagt
gttttagtagcccctgataatgtagttcaatcaagtgatgctgcattggaagcaataggt
gaattagacatgcaaaagagcagaaatggtggaacgggtgtgaaggaggttgattggagt
tcatttaactccgcttcaaatagccgtttcggatcgtattctgactttttgaatgaagtg
ggtgttagctcgggagatttggataggaaggatgtggtcagtgtctctgaagacatgcct
tgtggttttcgttcatctactgtaaatcacgaagaaggtggtcgatattatggatcgcaa
accgagaaggccattgatgggcaggacttaaatagcagtcaaaattgggaaaacctctat
ccagggtggaggtataacccaagcactgggcaatggcatgagattgaaggctatggtgtg
actgtgagtacccaggacaatttgtataccagttccacatcagccggtgataatgcagtt
acagagcaaaggtcagatgcttattgttttcaccaaccagtagcagaatatgggatggcc
aatgtttctaactggaatcaatgttcgcaacagaaggtggaggagtatccagcctatatg
gtttttgatccgcagtaccctgggtggtactatgacacaattgcccaagaatggcggctc
ttcgagtcgtacaagggagtaatgactcagccaaccaatgttagtcataaccaacagagt
caagatagtggctcttccacagttcacctcttacctgcagaaaatcatagcattcatcag
aactttggtcaaattgggaagtttgagtcacaaggcctgagtatccaaggccaagtatct
gcgagtgattacaattggcagaataggagtacatggcaaacggcgtcacttcctaacagt
ggggttatagaaattattgacaatcaagtgtcgcataatccatgcactcaaacttatcgt
gcaagcaattccgctgatcaacaaatgtggttacctgagcagacaagtcacagaattggg
agtgctattagcatttccgatcaaacctgtatccctggtgtaatcttttctgagcatagt
aatcagcataagccggaacctagcagtccaagcccacaggtgcatgtctcacctttttac
tttggaagtcagaaatcacctgatttttcacagccactgcagcattgcagtcagttccct
aatgcctccagtgaggggaggtcaccagctgggcggcctccacatgctctcgtgactttt
ggatttggtggaaaacttatagtcatgaaagacaacagttctttaaccaattcagcatgc
ggaagcaaggactcagctgatggtatcattagtgttctcaacttgatggatgttgtcatg
gacaaaactgttgcttcaagcataggattaggagcctgtgattatttccatgcgttatgt
cagcaatcttttcctggtccattggttggtgggaatgttggaagtagagaggttaataaa
tgggttgatgagaagattgctagctgtaaatctccagacatggaatacagaagaggtgaa
cttctaaggttgttgttctctttgctgaaaataggatgtcaatatcgtggtaaacttcga
tcaccctgtggaactgaccaagcattgaaggaaagtgattgtccagaattagctgtagct
cagctcttcgcatctgccaagagaaatgttggaccatatggcgcttttagtcgctgcttg
cagaactttccttctgaaggggagattcaggctactgcttttgaggtccagaagcttctg
atttccggtagaataaaagaggctttactgtgtgcacaggaaggtcacttgtgggggcca
gcccttgctctggcagctcaacttggtgacaagttttatagtgatactgtaaaacaaatg
gcactttgccagttagttgtgggatctcctctgaggacggtatgcctgcttattgctggg
caacctgctgatgtgttttcgaatggcatgtgtactagcagtctgcctggtgtggtaaat
ggatctcaacattcctctcaggtttgcaatggagctagttgtacgcttgacaactgggag
gagaatttagctatcataacagctaacagaacaaaagatgatgagcttgtgattattcat
ttcggagattgcctattgaaggagaggggtgagattcttgtggcccatatttgttattta
gttgctgaagcgaacttcgagtcttattcaggcagtgcacgagtctgccttattggtgca
gatcattggaattttcctcgaacatatgctagtcccgaggccattcagaggacagagtta
tacgaatattcaaaggtcctgggaaattctcaattcattgtaccaccttgtcaaccatac
aagcttatctatgcacacatgctggccgaagttggaaaggtttcagattctttgaaatac
tgtcaagctattttgaagtgcttaaaaacttgtcggtcaccagaagtggatgcatggaaa
attttagtgctttctcttgaggagcggataaaaattcaccagcagggtggatactcatct
aatttggctcctgcaaaactggtgggtaaattgctcaatttgtttgatagtacttctaat
cgtgttgtgggaggacttccaccacctgtaccatcgacatcacatgctagttcacagcgc
aatgaacatgattgtcaaaaagtcggcccaagggtgtctaacagtcaatcaacaatggcc
atgtcttctttggttccttcagcatcgacagaaccaataagcgaatggcaaggtgggagc
aaccgatcacggcacaatagaagcatttcggagccagattttggtaaatcaccaataaag
gacggaggctcccctgatatgaaaggaaacacaccaggcacaggtgggtcttctcgtttt
ggtcttttccgcacaaatctatttcaaaaaaccatggggttggtattaaggtcccgctca
gatcgacaggctaagttgggcgagacaaatcggttttattatgatgaaaagctgaagaga
tgggtagaagaaggggctgaaaccccgtctgaggaagtaaccttgccacctccaccacgg
aatgcagctttccagaacagaatgcctgataacactttgaaagatggacctaatcttgat
aggttacattctaatgatggatcagaccatgaaaaccaaagtcccttggaattgaactta
gggaaccaaccaattccacccagttcagatcagttctctgcccgtggacgcatgggcatt
cgtgcaaggtatgttgacactttccacaaggatggtgcagccccaccaaacttatttcga
tcaccttctcttccagctggaaaacctggggttggtcccaataccaagtttttcatccct
actccaagggctttgggagatgaaacagtacaaacaacggaagacttgcaagaagctgct
gttaacaacaaaagcccctctacatccgatgagagcaatccattttcatctccaccaaca
tcaacctcatcgacaacgacaatgcaccgggtgcctagcatggataatattgcaagaagc
agaactggagctctgggaaatgacaaaggatcccttccccctcattctaggcgtacagtg
tcatggagtgggagcttttgcgatccatctaatccttctaatgggacagaatttaaacct
cttggagaagtaatgcctcaacctttgcttatgcctggaaactcctcatcgatgcaggtc
tctatgaatagccgcaatcttgggaatgacctccatgaagttgaactttaa
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