Rhododendron vialii: 131331773
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Entry
131331773 CDS
T09330
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131331773
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131331773
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
131331773
NCBI-ProteinID:
XP_058221670
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Position
7a:3665738..3679198
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AA seq
848 aa
AA seq
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MNYEQRLIAAAKHVFDADARAAPPAVNPADFGVTATLKPHQVEGLSWLIQRYRIGVNVIL
VVLCPLSVTDGWVSEVAKFSPKLRVLRYVGDKNHRCNLRREMYEHVIEQSSPSYVLPLPF
DVLLTTYDIALMDQDFLSQIPWHYAIIDEAQRLKNPSSVLYNVLRDRFIMPRRLLMTGTP
VQNNLAELWALMHFCMPSIFGTLEQFLSTFKKAGDTLPGCDAAEVKERFKILKYILGAFM
LRRTKAKLIDSGALVLPRLTEITVMSPLVALQKKVYMSILRKELPRLLAFSSGASNQQSL
QNIVMQLRKACSHPYLFPGIEPEPYEEGEHLVLGSGKLIILDQLLQKLHDTGHRVLLFAQ
MTHTLDILQDFLELRNYSYERLDGSIRAEERFAAIRSFSQQSVKGSLKAEADQSGAFVFM
ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSVNLVTEHSVEEV
IMRRAEKKLQLSHNVVGDNLMDLEGKEAAGAEAGDLRSVIFGLQMLDPTDVSCEQPDQLI
ASELNAMAEKVIALRHKQKSDKEDVKFELSPMDLSNGRDLVIKDPASVAYPGFDEVSYLS
WVEKFKETSLSKDSPILELENRRNLIEERHQRAEAARRKAEEKKLSNWEALGYRSLSVQD
PLRPPNGDMMSDSGSVHLVYGDCTHPSTNCPSDPAIIFSCVDDSGNWGHGGMFDALAKLS
ANVPSAYHLASEFKDLHLGDLHLIEITEDGDEQTKSVNAPQWVGLAVVQSYNPKRKVPRS
NISIPDLECCLSKASFSAAQNSASIHMPRIGYQGGSDRSEWYTVERLLRKYAALYGIKIF
VYYYRRSS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgagcagaggctaatagcggcggcgaagcacgtattcgacgccgacgcacga
gccgcgcctccggcggttaatcccgccgacttcggggtgacggccactctcaaacctcac
caagtcgaaggcctttcgtggctcattcagagatatcgtatcggagtcaacgtcattctc
gtggtattatgtcccctcagcgtgactgatggttgggtatcagaggtggctaaattttct
ccaaaactaagagtacttcgttatgtcggagacaaaaatcatcgatgcaatctacgcagg
gaaatgtatgagcatgtgatagagcagtcctcaccatcttatgtactgccattacctttt
gatgtgcttttgactacgtacgacatagcattgatggatcaggattttctttctcaaatt
ccatggcattatgcaatcatcgatgaagcacaaagacttaagaacccttccagtgtgttg
tataatgtccttagagatcgtttcatcatgccaagacggttattgatgactggaactcct
gttcagaataacctggctgaactttgggctttgatgcatttttgtatgccttcaatcttt
gggacactggagcagttcctttctacgtttaagaaagccggggatactttgccaggttgt
gatgcggcagaagttaaggaacgatttaaaatcttgaaatatattttgggagcttttatg
cttcgaagaacaaaagccaagcttattgactccggtgctcttgtgcttcctcgactcacg
gagatcacagtaatgtcacccttggtggccctgcaaaagaaggtgtacatgtcaatattg
aggaaagagcttcccagactacttgcattctcttctggagcttctaatcaacaatccttg
cagaatatagtaatgcagttacgaaaagcatgtagccatccttacctctttcctggtatt
gaacccgagccttacgaagagggtgaacacctggttctgggtagtggtaaactcataatc
ttggatcagctacttcaaaaactacatgatactggacatcgtgtgctgctgtttgctcaa
atgacccatacacttgacatattacaggatttcttggagttaaggaactattcttatgag
cgtttggatggatcaattcgggcagaggaacgctttgcagcaataaggagtttcagccag
caatctgtcaaagggagtttgaaggccgaggctgatcagagtggtgcatttgtctttatg
atttctacaagagctgggggagttggcttgaatcttgtggctgctgatacagtcatattt
tatgagcaagactggaatccccaggtggataagcaggcacttcagcgggcacaccgcatt
ggtcagatgaatcatgtcctgtctgttaacttagtcaccgagcattcagtcgaggaggtt
atcatgcggagagcagagaaaaagctgcagctaagccataatgttgtaggagacaatctt
atggacctggaaggaaaagaagcagcaggagctgaagctggtgacttgcgatctgttata
tttggcttgcaaatgttagatcccacggatgtaagttgtgaacaaccagatcaactgatt
gcgtctgaattgaatgctatggctgaaaaggtaattgcattgcggcacaagcaaaaatca
gacaaggaggatgtgaagtttgaacttagtccaatggatctatcaaatggacgtgacctt
gtgataaaggatcctgcttctgttgcgtatcccggttttgatgaagtgtcttatctctct
tgggttgaaaagttcaaagaaacatcactgtcaaaggatagtcctatcttggagttggaa
aataggagaaacttaattgaggaaaggcatcaaagagctgaggctgcaaggaggaaggca
gaggagaagaagttgtccaattgggaagctctgggttaccgttcactatcagttcaggat
cctcttcgccctcccaatggtgatatgatgtctgattcaggttctgttcatcttgtttac
ggagactgtacacatccatcaacaaattgtccatcagatccggcaatcatattcagctgt
gttgatgactctgggaactggggccatggaggtatgtttgatgcccttgcaaaactttca
gcaaatgtcccaagtgcatatcatctagcttctgaatttaaggatctgcatcttggtgat
cttcatcttatagaaatcacagaggacggtgatgaacagaccaagtctgttaatgctcct
caatgggtgggattggctgttgtacaatcctacaatcctaagcgtaaagtgcctcgcagc
aatatctctattcctgacttggagtgttgcctatctaaagcatcattctcagctgcccaa
aattctgcttcaatccatatgccaagaattgggtaccagggtggatcagatcggtcagag
tggtatactgttgagcgtcttctgcgaaagtatgccgccttatatggcataaagatcttt
gtgtactactatcgacgttcatcttga
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