Rhododendron vialii: 131331886
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Entry
131331886 CDS
T09330
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rvl
Rhododendron vialii
Pathway
rvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131331886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvl02000
]
131331886
Transporters [BR:
rvl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131331886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_25
SMC_N
AAA_16
ABC_trans_N
AAA
AAA_28
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
131331886
NCBI-ProteinID:
XP_058221819
LinkDB
All DBs
Position
7a:11888545..11913735
Genome browser
AA seq
1452 aa
AA seq
DB search
MDGVGGEDLMRAISARLSSSNLWKGSGREAFSLSSSEEQDEEALKWASLEKLPTFARIRT
GILSEEEGRIREIDVKKLGAIEKRNLVERLMTIAEEGNENFLLQLKERINRVGIAFPNIE
VRFQNLSVDAEAYVGARALPSIFNFFFNALQGFLNCLHVLPSRKIPLAILHDVSGIIKPG
RLTLLLGPPSSGKTTLLLALAGELDPDLKVSGNITYNGHGMNEFVPQRTSAYISQHDLHL
GELTVRETLAFSARCQGVGQRYEMLTELSRREKEANIKPDPDLDIFMKAVSLEGERANLM
TDYIIKILGLDVCADSLVGDAMLRGISGGQKKRVTTGEMMVGPARALFMDEISTGLDSST
TFQIVNSIKNSSHILQGTFVISLLQPAPETYDLFDDIILLSDGQIVYQGPRENVIEFFEH
MGFRCPERKGVADFLQEVTSRKDQEQYRARRDEPYSFVTAREFAESFKLFHVGRELDNEL
SIPFDKAKSHPAALSTRKYGVSKKELLKALISREYLLMKRNSFVYIFKMTQLAIMAFIVM
TVFLRTKMSKETTEDGVIFLGALFFTLLLTMFTGMSELALTVMKLPTFYKQRNLLFFPSW
AFSLPAWILKIPMTFMEVSIYVFTTYYVIGFDPNVGRLFKMYLVLFCINQMASGLFRLIA
GIGRNMIVANTFGSFALVTMVVLGGFVLSRDNIKKWWIWGYWVSPLMYGQNAIAVNEFFG
HSWKQVPFNSTESLGVLVLKSRGLFPEAHWYWIGVGALVGYVFLFNGLYTLALAYLSPFE
KPQAILSEETVAERNSVKAGEVIELSSRGKSSSERGDEVQTSLSSKSRSSRIGSNSEDNK
NMQRGMVLPFEPLSIAFNDIKYSVDMPQEMKAQGIPEDRLELLKGVTGSFRPGVLTALMG
VSGAGKTTLMDVLAGRKTGGYIEGSILVSGYPKKQETFARIAGYCEQTDIHSPHVTVYES
LTYSAWLRLPSEVDSATRKMFVDEVMELVELTPLREALVGLPGISGLSTEQRKRLTIAVE
LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLL
KRGGEEIYVGPLGHHSAHLISYFEGINGVSKIKDGYNPATWMLEVTSVAQEAAHGVNFAE
VYKNSELYRRNKETIAELSTPPPGSKDLYFATQYSQSFFTQCMACLWKQHLSYWRNPPYT
AVKFFFTTIIALMFGTIFWQLGSNRGTQQDIFNAMGSMHSSVLFLGIQNATSVQPVVAVE
RTVFYREKAAGMYSALPYAFGQVVIELPYILVQSVIYGVIVYSMIGFEWTTDKFFWYLFF
MYFTLLYFTFYGMMAVAVTPNQSIAAIVASAFYAIWNLFSGFIIPKTRIPVWWKWYVYIC
PVSWTLYGLLASQFGNIQTELDTGETVEYFVQTYFDFKHDFVGYVAIIVVGFTVLFAFLF
AFSIKAFNFQRR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtaggaggagaggacttaatgcgtgcaattagtgcacgtttgagcagttct
aacctctggaaaggcagcgggagagaggctttctctctctcttccagtgaagagcaggat
gaagaagcactgaaatgggcatccttggaaaaactgccaacattcgcgaggataaggaca
ggaatcctgagcgaagaagaggggcgaataagagaaatcgacgtcaagaaacttggggcg
atagagaagaggaatttggtggagaggcttatgacaattgcagaggaaggtaacgagaat
ttcttgctgcagctcaaggaaagaatcaacagggttgggattgcttttccgaatattgaa
gtgaggtttcagaacttgagtgttgatgcagaggcctacgtcggcgccagagcactccca
tcaattttcaacttcttttttaatgctctccagggattcttgaattgtctccatgtttta
ccaagtaggaagataccattggcgattctccatgatgttagtggaatcatcaagcctggc
agattgacattgcttttaggtccaccaagttctggaaagactacattgctactagctttg
gctggagaacttgatcctgatctaaaagtttcaggaaatataacttacaacggtcatggt
atgaatgagtttgtcccacaaaggacatcagcctacataagccagcatgacctgcattta
ggagaattgacagtaagagaaacactagctttctcagctagatgtcaaggggtcggacaa
cgttatgaaatgctaacagaattatccaggagagagaaggaagccaacattaagccagac
ccagatctagatattttcatgaaggcagtatcactagaaggtgagagggccaatctgatg
accgactatataattaagatattgggactggacgtttgtgctgacagtttggtgggtgat
gcaatgctcagaggcatttctggtggacaaaaaaaacgagtcaccacaggggagatgatg
gttggaccagctagagcgctcttcatggatgagatatctactgggttggacagttctacc
acttttcagattgtgaactcaatcaagaacagcagtcatatccttcaaggaacctttgtt
atctctctcctccagccggcaccagaaacttacgacttattcgatgacataattctcctc
tctgatggtcaaattgtttaccaaggcccgcgtgagaatgtgattgagttctttgaacac
atgggcttcaggtgtccagagaggaaaggagtggctgacttcctacaagaagtgacatcg
agaaaagatcaagagcaatacagggcaaggagagatgagccttatagttttgttactgca
agggaattcgcagagtcattcaagttatttcatgttggtcgggaactagacaatgagctt
tccatcccatttgacaaagccaagagccacccagcggctttatcaactaggaaatatgga
gttagtaagaaagaactgctgaaagctctcatatccagagagtacttgctcatgaagaga
aactcatttgtctacatattcaagatgactcaacttgcgataatggcattcattgtgatg
acggtatttttaagaactaagatgagcaaggaaacaacagaagatggtgtgattttcctg
ggtgctctcttctttactctccttctcactatgtttactggaatgtcggagctagccttg
acagtcatgaaacttcctaccttttacaagcaaaggaaccttctcttttttccgtcttgg
gcgttctcattacctgcatggatcctcaagataccaatgacatttatggaagtcagtatt
tatgtgttcaccacttattatgtgataggttttgatccaaacgtcggaaggttgttcaaa
atgtaccttgtgctcttttgtattaaccagatggcttctgggctattccgactcattgcc
ggaataggacgaaacatgattgtggcaaacacatttggatcatttgcattagttacaatg
gttgtgttgggaggatttgtcttgtcaagagataatataaagaagtggtggatatggggt
tattgggtgtcgcctctgatgtatggacagaatgctatagcagtgaatgaattttttgga
cacagttggaaacaagtgccttttaattccacggaatcattaggcgtgttggttttgaag
tctcgtggattatttccagaagcacattggtattggattggagtaggagctttggttgga
tatgttttcctgttcaatggcctatacacattggccctagcatatctcagcccatttgag
aagcctcaggcaattctatctgaagaaacagtggccgagagaaattccgttaaagcagga
gaagttattgagctatcctcaagagggaagagctcttccgaacgaggcgatgaagttcaa
acaagtttatcatcgaaatcaaggtcttcaagaatcgggagcaatagtgaagataacaag
aacatgcagcgaggaatggttctaccatttgagcccctttccatcgctttcaatgatatc
aagtattcagtagacatgccacaggaaatgaaagcacaaggtataccagaagaccgacta
gaacttctgaaaggagtaactggttcttttagaccaggagttcttaccgcactaatgggt
gttagtggggccggtaagaccactctaatggatgtcttggctggtagaaaaactggtgga
tatattgaggggagtatcttggtttccggatacccaaagaaacaagaaacatttgctcgc
atagctggatattgcgagcaaactgatattcattctcctcatgtaacagtttatgaatct
ttaacttattctgcgtggcttcggttgccttctgaagttgattccgctacaagaaagatg
ttcgttgacgaggtaatggagcttgttgagctaaccccactaagggaagcacttgtcggg
ttgcctggcataagtggtctttcaaccgagcaacgcaagaggctgacaattgcagttgag
cttgtagccaacccatcgattatattcatggatgaaccaacttcaggacttgatgctagg
gcagccgcaatagtgatgagaacggtaagaaacacagtcgatacaggaagaactgtggtg
tgcaccatccatcagccaagcatcgacatctttgatgcattcgatgagctatttctattg
aaacgaggaggtgaagaaatatacgtcggtccattaggccaccattctgcacatctcatc
tcatactttgagggcatcaatggagtcagtaaaattaaagatggttataatccggctact
tggatgttagaggtgacttcagtagcacaagaagcagctcatggggtcaactttgctgaa
gtgtacaagaactcagaactatacaggagaaacaaagaaacaattgcggaactaagtacg
cctccgccaggttcaaaagatctttactttgccactcaatattcgcaatctttcttcacc
caatgtatggcatgcctatggaaacaacacctatcatactggcgaaacccaccatatacc
gcagtgaaattctttttcacaactatcatagctttgatgtttgggacaatcttctggcag
cttggctccaacaggggaacacaacaagatatattcaatgcaatgggttctatgcatagt
tctgttctttttcttggtatacaaaatgccacgtcggtgcagccagtagttgctgttgag
agaacagttttttatcgggaaaaggcagctggaatgtactcagctttaccgtatgcattt
ggacaggttgtgattgagctcccatacattcttgtgcaaagtgtcatatatggagtcata
gtctacagtatgattggatttgagtggacaacagacaaattcttttggtacctgtttttc
atgtatttcaccttattatacttcacattctatgggatgatggcagtagctgtaactcca
aaccaaagtatcgcagccatagtcgcttctgccttctatgctatatggaacctcttctcc
ggctttataattcctaagacgaggattccggtgtggtggaagtggtacgtctacatttgc
cccgtctcttggactttgtatggattattagcttcacagtttggaaacattcagaccgag
cttgacacgggtgaaacagtggaatattttgtgcaaacgtactttgatttcaagcatgat
tttgtgggatatgtcgctataatcgttgttgggttcactgtgctctttgcgttcttattt
gccttctcaattaaggcatttaactttcagagaagataa
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