Rhododendron vialii: 131331962
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Entry
131331962 CDS
T09330
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131331962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131331962
Spliceosome [BR:
rvl03041
]
Complex A
Other components
Complex A specific factors
131331962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
RRM_5
zf-CCHC
KH_PNO1_2nd
PHD_4
Motif
Other DBs
NCBI-GeneID:
131331962
NCBI-ProteinID:
XP_058221927
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Position
7a:complement(13046322..13049943)
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AA seq
758 aa
AA seq
DB search
MDSLQQPNPPLPSETLTSPEPPQPPYSSTSETLTQSSPPLNPPQPPPENLPPPNPTPPQP
QPHDPNPVSEDQTEKQEVQRPLLSDNGRDGSGGEEETSSRRRRRRSRWEDGGGEQNNEEQ
PKKRKSRWADDEPKPVFQLPDFMKDLAGGMDTDPEIQALNARLLEISRILQSGMQLDDRP
EGARSPSPEPVYDNIGIRINTREYRARERLNRERQEIISQIIKRNPNFKPPADYRPPKLQ
KKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGRLGQKRDLKFD
PAENEDLHVLVEAETQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIKDDEY
CRLCGEAGHRQYACPSRMSTFKSDVLCKICGDGGHPTIDCPVKGTVGKKMDDEYQNFLAE
LGGTMPESVAKQNPTLSIMGSNSSGTNPPWVSGNGTGGTGTTSRPGLGSTVTAVGKEIDD
TNLYIGYLPPTLDDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGFVKYSDVAQANQAIT
SMNGYRLEGRVIAVRVAGKPPQPVVTPGPPPPPMSTYHPPNQAFGPPPPGTLGSMPPGSY
MGAPVPWGPPAPLPYAPYGPPPPGANIYNAVQGQTMPPYGVPYPPPPQAAVSSAPSQSNG
SVDSAESGANNIYGNSAMGMPPNPQTTYHPSSLGYPSYYAVAPPPPPVSLPTMEQQSFAS
APWASNPPAPPPIKSAEQSQQASYGTDPEYEKFMAEMK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggattcactgcaacaaccaaaccctcctctcccctccgaaaccctaacttctcctgaa
cctcctcagcctccctactcctcaacatcagagaccctaactcaatcttctcctccacta
aatcctccccaaccccctcccgaaaacctacctccacccaatcccactcccccacagccc
caaccgcacgacccgaacccggtatccgaagaccaaaccgagaaacaagaggttcagagg
cctttgttgtccgataatggtcgggacgggtcgggcggcgaggaggagacctcgagccgg
aggcggcggcggcggagtaggtgggaggacggaggaggcgagcagaacaacgaggagcag
ccgaagaagaggaagtctcggtgggccgacgacgagccgaagccggtgtttcaattgccc
gacttcatgaaagatttggccggaggtatggacactgaccccgagatacaagccctaaat
gctaggttactagaaatcagtcgaatcttgcagtccggtatgcaattagatgaccgtccg
gaaggcgccaggtctccttctcccgaacccgtttatgacaacatcgggattcggataaac
actagagagtatcgcgcgcgcgaacggcttaacagagagaggcaggagataatttcgcag
ataattaaacgaaaccctaattttaagccgccagcggattataggccgccaaagcttcag
aagaagctttatataccgatgaaggagtacccgggctataactttatcgggcttataatt
ggaccgagagggaatacgcagaagaggatggagaaggagacgggggcgaagattgtgatt
cggggtaaagggtcgattaaggaagggaggttggggcagaagcgggatttgaagtttgat
cctgcggagaacgaagacttacatgttttggttgaggccgagacacaggaggcacttgag
gctgcggcggggatggtggagaagctcttgcagccagtggatgaagtgttgaatgagcat
aagaggcagcagcttagggaacttgctgcattgaatgggaccattaaagatgatgagtat
tgtaggttgtgtggtgaggctggacatcggcagtatgcgtgtccttcgcgtatgtctact
tttaagagcgacgtgttgtgtaagatctgcggtgatggtggtcaccctactattgattgt
cctgtgaaaggaactgtcggaaagaaaatggacgatgagtatcagaacttcttggcggaa
ttgggtgggactatgccggaatctgttgccaagcaaaacccaacattgtctattatgggt
tccaacagttcgggaactaaccccccttgggttagtggaaatggaaccggaggtacaggg
acaacatcacgtcccggacttgggagcactgtaactgcagtggggaaagaaatagacgac
acaaacttgtatatcggatacttgccgcctacgcttgacgacgatgctctgatcagattg
ttttcgccttttggtgacatagtaatggctaaggttattaaggaccgggtgactggattg
agtaaagggtatggtttcgttaagtattctgatgttgcccaggcaaatcaagccattact
agcatgaatgggtatcgtctagagggtagagtaatagcagttagagtagcgggtaagccc
ccacaaccagttgttacccctggacctcctccacccccaatgtccacttaccatcctcct
aatcaggcatttggcccaccgcctcctggtactcttgggagcatgccacctggcagctac
atgggcgcccctgttccttggggaccaccagctcctcttccttatgctccttatggccca
ccgcctcctggagcaaatatttacaatgctgtccaaggtcaaactatgcccccttatggt
gtaccttatcccccgcctccacaagctgctgtctctagtgctccatctcagagtaatggg
tctgtagattctgcagagtctggagctaataacatatatgggaattcagcaatggggatg
ccaccaaaccctcagactacatatcatccgtcttcgttgggttatccttcttattatgct
gtagctcctcctcctccacctgtatctcttccaacaatggaacagcagagctttgcaagt
gcaccatgggcgtctaaccctcctgctccaccacccattaaatctgcagagcaaagtcag
caagcaagttatggaacagatcctgagtacgagaagttcatggctgagatgaaataa
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