Rhododendron vialii: 131332037
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Entry
131332037 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131332037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131332037
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131332037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
COG3_N
Motif
Other DBs
NCBI-GeneID:
131332037
NCBI-ProteinID:
XP_058222037
LinkDB
All DBs
Position
7a:complement(3625045..3642011)
Genome browser
AA seq
1092 aa
AA seq
DB search
MSGFSFSSSTPLFSTFSSSNPTSSFSFSEFSLHPSSNPTPSLFGTTPASSAAAPSFGFGS
SNPPASSSFGFSPLFGTISSSTATATPLLGVPSSASAFATTSSASATTTKTSTSMTVSST
SGTTSTVSTTISPAPKLPFEINGKTVEIINEWNSELLERTGKFQKQANAIAERDKRILQN
CDILVRLETEVAKVVETQANLEWQLELIETHQQEVDKGLQSVEEETERIYKHERNLLLNN
EALSTQDAMYEQAEIIERELKQLAEQIKTIIQTNNLVMDSCHSLDTLLWKLLDESLFQEI
KEKEYGSYDWQSGKLDPAMMNLTKGIAVAAPSRARPPSKMSGFSFSSTPSTSSSSSSTPL
FSAFSSSNPSPFPFASSSSQNPASSFSFSLNPSPNPTSSSPASSLVGTATPASSAAPPSF
GFGSSNPPASAKAPALFGFGSSAASSTPFFGTGAASSQFGNSSLFSSTPNLFGSTTAPSS
VSNTGASVFGSSTTSNLFGTSTSTPTPVSTPSTSAFGSSITPNLFGTSAPGSVSTAFGSS
ITAPNLFASSTPSPLSTTSTTTLFGSTTSGPVSTPTANFFGSSVANNSASTGPNLFGSAS
TGTTAASPLASSNLFGAGTSSATLSSSPLFGSSTSASTAPSFPSLFGSSSSSSTSSSPFT
FPATSAISSSTTTTAVLSSSTGSSNFSFGIPASSSGSQSSFGFTNVVSNVGTGTSTPAAK
PTSIGFGTSSSTLFSTITTTTSASTPTATVTSSSAPTTITTAASVAPVPVFALSSSSSTT
ASTTVASSTPATTFPSFSSTTSLAATSATTSSIQSFSLSKPLTPASSSQAQSTTALPLFG
VPPSTSGFATTSSASATTTQTSTSLTVASTSGTTSTVSTTISPAPKLPSEITGKTVEEII
KEWNSELQERTGKFRKQANAIAEWDKRILQNRDVLLRLEAEVAKVVETQSTVERQLELIE
THQQEVDKALLSVEEEAQRIYKDERNVLLDDEAASTRDAMYEQAEIIERELEQMAEQIKT
IIQTLNANQGGELDAVDGLSPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKLASQGSAV
NRELIAPKYWLS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttctcattctcctcctccacccctctcttctccacattctcttcttcaaac
ccgacctcttctttctccttctctgagttctctctccatccatcgtcaaaccctaccccc
tccctcttcggaaccaccccagcctcatccgccgccgccccttccttcggcttcggctcg
tccaatcctcccgcttcgtcttcattcggattcagccctttattcggcaccatatcttct
tcaacagcaactgctacacccctgcttggtgtaccttcatctgcatctgcttttgcaaca
acatccagtgccagtgctactactactaagacatcaacatcaatgactgtttcttctact
agtgggactacttcaactgtcagcactacaatatcccctgctccaaaattaccatttgag
atcaatgggaaaactgttgagattatcaacgagtggaactctgagctactagaacgtact
gggaaatttcaaaagcaggctaatgcaatagctgagcgggacaagagaatcttgcagaat
tgtgatattcttgttagacttgagaccgaagtggccaaagttgttgagactcaagctaac
ttggaatggcaactagagcttattgagactcatcagcaggaggttgataagggtttgcaa
agtgtggaggaagaaactgagcgcatatacaagcacgagcgcaatttgcttcttaacaat
gaagcattgtccacacaagatgcaatgtatgagcaagctgaaatcatagagagggaactg
aaacagttggctgaacagatcaaaactattattcagacgaataatcttgttatggacagt
tgtcatagccttgataccttgttatggaaattgcttgatgaatccttgtttcaagaaata
aaggagaaagaatatggatcatatgattggcaaagtggcaaactagaccctgccatgatg
aatctaaccaagggaatcgccgttgccgccccttctcgtgcccgaccgccttcaaaaatg
tcgggcttctcattctcatccaccccatcaacctcctcctcatcgtcctcaacccctctc
ttctccgcattctcttcatcaaacccttccccattccccttcgcatcctcctcctctcaa
aaccctgcctcttctttctccttctctctcaatccctctccaaaccctacctcttcctcc
cctgcctcctctctcgtcggaaccgccaccccggcctcgtccgccgcccccccttccttc
ggcttcggctcgtccaatcctccggcttccgctaaggccccggctttgtttggattcggc
tcttcggctgcttcttccacccctttcttcggcacgggtgcagcttcatcccagtttggg
aattccagtctgttttcatctactccaaatttattcggatctactactgctcccagttcc
gtttcaaacaccggtgcatcggttttcggttcttcaaccacatcaaacttgtttggaacc
agtacttcgactcccactcccgtttcgactcccagcacatctgcttttgggtcttcaatt
actccaaacttgttcggaaccagtgctcccggctctgtttcaactgcttttgggtcttca
attactgcgccaaacttgttcgcctcttctactcccagccctctttcgactaccagcaca
acaacactctttgggtctaccacttcgggtccagtttcgactcccactgccaactttttt
gggtcttctgttgcgaataattcagcttctaccggtccaaacttgtttggatcagcttct
actggtactaccgctgcttctccacttgcttcttccaatttgtttggagctggtacatcc
agtgcaactttatcttcttctccgttatttgggtcttcaacttcggcttcaaccgcacct
tcttttcctagtttgtttggatcatcttcctcaagttcaacttcgtcttcgccttttacc
tttccagccacttcggcaatctcttcttcaacaacaacaactgcggttttgtcttcgtca
acaggctcatcgaatttctcctttgggataccagcgtcttcttctggttctcaatcttca
tttgggttcacaaatgtagtttctaatgttggcacgggcactagcactccagctgcaaaa
cccacttccataggctttggaacttcttcatctactttgttttctaccatcacaaccacc
acaagcgcttcaactccaaccgccacagttacctcatcttctgctcctactactattact
actgctgcttcggtggctcctgttccagtatttgcccttagttcctcatcctcaactact
gcttcaacaacagttgcttcatcaacccctgctactacctttccgagttttagtagcacc
acgagcctagctgcaacctcggccactacaagttcaattcaaagtttttcactatctaaa
ccactgaccccggcctcatcctcacaagctcaatcgacgactgctttgcccctgtttggt
gtaccaccttctacatctggttttgcaacaacatccagtgccagtgctactactactcag
acgtcaacatcactgactgttgcttctactagtgggactacttcaactgtcagcactaca
atatcccctgctccaaaattaccatctgagatcactgggaaaactgttgaggagattata
aaggagtggaactctgagctacaagaacgtactgggaaatttcgaaagcaggctaatgca
atagctgagtgggacaagagaatcttgcagaatcgtgatgttcttcttagacttgaggct
gaagtggccaaagttgttgagactcaatcaactgtggaacgacaactagagcttattgag
actcatcagcaggaggttgataaggctttgttaagtgtggaggaagaagctcagcgcatt
tacaaggatgagcgtaatgtgcttcttgacgatgaagcagcatccacacgagatgcaatg
tatgagcaagctgaaatcatagagagggaactggaacagatggctgaacagatcaaaact
attattcagacccttaatgccaaccagggtggagaactggatgctgttgatggattgtct
cctttggatgttgttgtcagaatattaaacaaccaactaagttccctgatgtggattgac
gaaaaggctgaggaattctcatcgcgtattcagaagcttgcaagccaaggttctgctgtg
aaccgtgaattgattgccccaaagtactggttgagttga
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integrated database retrieval system
