Rhododendron vialii: 131332041
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Entry
131332041 CDS
T09330
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131332041
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131332041
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131332041
Enzymes [BR:
rvl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
131332041
Amino acid related enzymes [BR:
rvl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
131332041
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131332041
Prokaryotic type
131332041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF3490
Motif
Other DBs
NCBI-GeneID:
131332041
NCBI-ProteinID:
XP_058222043
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Position
7a:36136852..36143992
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AA seq
510 aa
AA seq
DB search
MGSQCCFGGLKLASSSILTPLPRTLTLALLLLHRHRPSRRPPLPLTVRALSSPAIQTAPS
MFPDEKVVKPQWKASIDFKWIRDNKVAMAANIENRNSSANLELVLELYEKVLTVQKEVEQ
LRAERNVVANKMKGKLEPAERQKLIEEGKNLKDRLVSVEEDLLKLTDKLQQEAQRIPNMS
HPDVPVGGEDCFVLRKMVGSPRVYHFPIKDHLQLGKDLDLMDFDTAAEVSGSKFYYLKNA
AVLLEMALVNWTISQLMRRGFTPLTTPEIVRSSIVEKCGFQPRGENTQVYSIEGSDQCLI
GTAEIPVGGIHMDSILAETSLPLKYVALSHCFRTEAGAAGTATRGLYRVHQFTKVEMFIL
CRPEESESYHEELIGIEEDLFSSLGFHFKTLDMASGDLGAPAYRKFDVEAWMPGLGRFGE
ISSASNCTDYQSRRLGIRYRPEAMSTNPKKGKGNLPPPEFVHALNATACAVPRMIVCLLE
NYQEEDGSVVIPEPLRPFMGGLEVIRPKSR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgcaatgttgcttcggaggcctcaaactcgcttcttcctccattctcacaccc
ctccccagaaccctaaccctagccctcctcctcctccatcgccaccgcccgtcccgtaga
cccccacttccactcaccgtcagagctctctcctctccggctatccaaactgctccctcc
atgttccccgacgaaaaagttgttaagcctcaatggaaagcgtcgatagatttcaagtgg
atacgggacaacaaggtggcgatggcagccaacattgagaaccggaattccagtgctaat
ttggaacttgttcttgaactctatgagaaagtgctaactgttcagaaggaagttgaacag
cttcgtgctgaaaggaatgtggttgcaaataagatgaaaggaaaactggaacctgctgag
cgtcaaaagctaatagaagaaggaaagaatttgaaggacagacttgtttctgtagaagaa
gacttgcttaaacttacagataagcttcagcaggaagcacagcgaataccaaatatgagc
catccagacgttccagtaggaggggaggattgttttgtgttaagaaaaatggttggtagc
cctcgggtgtatcacttccctattaaagatcaccttcaacttgggaaggaccttgatctc
atggactttgatactgctgcagaggtcagtgggtcaaaattttactacctcaagaatgca
gcagttctactagagatggcccttgtcaactggacaatctcgcaactcatgcgaagggga
tttacacctctgacaaccccagaaattgtgagatcttccattgttgaaaaatgtggcttc
cagcctcgtggagaaaatacccaggtttattctatagagggtagtgatcaatgcctcatt
ggcactgcagagattccggtgggaggaattcatatggattctattcttgcagagacgtca
ttacctttaaagtatgtggctttatcccattgctttcgtactgaagctggtgctgcaggc
acagcgacaaggggtctttatcgagtccaccagttcaccaaggtagagatgtttatcctt
tgccggcctgaggaaagtgaatcttaccatgaggagttaattggaattgaagaggacctc
ttctcgtcactaggcttccatttcaaaactttggatatggcttcaggagatttaggtgca
cctgcttatcgaaagtttgatgtggaggcatggatgccgggattaggacgttttggtgag
atatcaagtgcatcaaactgtacagactaccaaagtcgcagacttgggatacggtaccgt
ccagaagccatgtcaacaaatcccaaaaagggtaaaggcaatcttcctccaccggagttt
gtgcatgcgttaaatgccacagcctgtgctgtcccgcggatgattgtatgtttgctcgag
aactatcaagaagaagatggttctgttgttatccccgagccattgaggccctttatgggt
gggcttgaggtcattaggccgaagtcccgatag
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