Rhododendron vialii: 131332110
Help
Entry
131332110 CDS
T09330
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131332110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131332110
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131332110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131332110
NCBI-ProteinID:
XP_058222162
LinkDB
All DBs
Position
7a:complement(14193000..14204658)
Genome browser
AA seq
1296 aa
AA seq
DB search
MDYSKLTLAKRTRLQEQVFFQQYNEEKKKKKAAENQKAAEKQKEPESSAGDRGSRYGDSG
DGAAADGGDSRYVADSGQFQANVGNVGFQEGSGSVFHKERMEKNHGVLIDEERENQGNVG
RVESEKTCESRKKIRTEKLKRNSKVVETFDDDDDDDDDVVFLRVDYSKAKVGVERGAAGS
SCDGGSKGLKGTTGESTESNASGSAESVSGPGDSEESESEEESEGSSDQDYLGSGDDDLD
ASSSCSDFAEEDDEPGVRNGKGKEKAAGMGREERVKAGLKRCRGKSPEVVFLRQSGVEGE
AEDRVRFKRRQEESPEVVFLGQSRGDGGELNGDDVRKRGFVEGDGEEESTESRGRGRPLG
KKNYSLVDGERDGSGGFKRKRYSGLDILVGCDEEQDGKEEESEGPKSVAERLRLRPRRGN
KEELGGVSCPFTLTDEDEDLESSSSGEDEDTNEISDRSEKSKGKVGRPPGKGRRDHGDST
APMSVNVDEDICCKDGEPVGKAREKAKEKVGRPAKRRPSIPVAKILADSILQKGDVLVEE
LVSSKAPDMEPTLPLKFRFLDEELITPEKSPSDTEADKLFAEMDFVLAACAIGDSDSSMV
DNEDNFTEETESDPATCCRQGKHQLVLDEQIGLKCKFCSFVKLEIKHILPSFSKHPLGRP
DKNYWNSSDHFNFDKLQFQDSASTCNSKGHICAEGTVWDTIPGTKTSMYAHQREGLEFIW
KNIGGSIYLEELKNSACDGGSGCIISHAPGTGKTRLAIVFLQTFMKLYPECRPVIVAPRS
MLLTWEEEFKKWKVGIPFHNLNQPEFSGRENEAALNLLNKAGRQGKNMNSVRLVKLYSWR
KGQSVLGISYRLFEKLAEDGIVSTNDEGGSKTKRKFKRYAEAEMVRKMLLELPGLLVLDE
GHTPRNDQSLMWRALSGVETQRRILLSGTPFQNNFDELFNTLCLVRPKFCDRIVTGIKGD
SRRNRGREGRKGRGKWASLTKSIGKDAGDKLNELRALIDPFVHVHKGMILKENLPGLRDA
MVFLNPTEFQKTLIGVIQGRPNVFNRDHLASLISVHPSLLLGHALSDEEGLSIDTNELET
LRFDSKAGVKTNFLMELIRLSMAVKEKVLVFSQFIEPLTIIREQLKSSFGWTEGKDLLYM
DGKIEARHRQSSISLLNDPDSQVQVLLASIRACSEGISLVGASRVVLLDVLWNPSVERQA
ISRAYRIGQKKVVYIYRLITSGTMEGEKCARQAEKDRLSELVFSSADGKLHRKETISRAV
NDDKILEEMVQHEKISYMFEKILNQPEESNLIHTCG
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggattacagtaaattgactctggcgaagagaactcggctccaagaacaagtatttttc
cagcagtacaacgaggagaagaagaagaagaaggccgcggagaatcagaaggccgcggag
aagcagaaggagccggagtcctcggccggcgatcgagggagcagatacggagattccggc
gacggggccgcggctgacggcggcgattccaggtacgtggctgattcaggtcaattccaa
gccaacgttgggaatgtgggttttcaggagggttctggttctgtttttcataaggaacgg
atggaaaagaatcatggggttttgattgatgaggagagagagaatcaggggaatgtgggt
agggttgaatcggagaaaacgtgtgagtctaggaaaaagataagaactgagaagttgaag
agaaacagtaaagtggttgaaacgtttgatgatgatgatgatgatgatgatgatgttgta
ttcttgcgggtggattatagtaaggcaaaggttggagttgaacgaggtgcggcgggttca
agttgtgatggtggttctaagggtttgaaggggacgacgggtgagagtacggaatccaac
gccagtggttcggcggagtcggtttctggcccgggggactcggaggagtcggagagtgag
gaggaaagcgagggttccagtgaccaggattatcttggttctggtgatgatgatttggat
gcttcaagttcatgtagcgatttcgcggaggaggatgatgagccaggtgttcggaatgga
aaggggaaggaaaaagcggctggaatggggagagaggagagggttaaagccggattgaag
aggtgtcggggaaaatcgccggaggttgtctttttgcggcaatcgggtgtggaaggagag
gcagaagatagggttcgattcaagaggagacaagaggaatcgcccgaagttgtttttcta
gggcaatcacgcggagatggaggagaattgaatggtgatgatgtgaggaagcgtgggttt
gttgagggggatggagaggaggaatcaacggagagccgaggaagaggtagacccctcggg
aaaaagaattatagtttagttgatggggaaagagatgggtctggtgggtttaagagaaag
agatattctgggttggatattttggtcggttgtgacgaagaacaagatgggaaggaagaa
gagagtgaagggccaaaaagtgtagcggaacgacttcgtttgcggccgcgacgtgggaac
aaagaggagcttgggggcgttagttgcccttttactcttaccgatgaggatgaggatctc
gaatcctcctcatctggggaggatgaggacacaaacgagatcagtgataggagtgagaaa
agcaaagggaaggtcgggaggccgccgggtaagggaaggcgcgatcatggggattctact
gctccaatgtcggtcaacgttgatgaagatatctgctgcaaagatggcgaacccgtgggg
aaagctcgtgagaaagcaaaagagaaggtcgggaggcctgctaagagaaggccttcaata
cctgtggcgaagatccttgcagattccattttgcagaagggtgatgtgcttgtggaggag
ttggtttcctcaaaggctcctgatatggaaccaacactaccactcaagttcaggttttta
gacgaggaactgattactccagagaaatcgccttcggatacagaagcggataaacttttt
gcagagatggatttcgttcttgcagcttgtgcgattggtgactcagattcttccatggtt
gacaatgaggataattttactgaagagactgaaagtgatccagcaacctgttgccgtcaa
gggaagcatcagcttgttcttgatgaacaaattggccttaaatgcaaattctgctctttt
gtgaagttggagattaagcacattttgccttcttttagtaagcatccgctgggaaggccg
gacaagaattactggaacagcagtgaccatttcaatttcgacaagctgcagttccaagac
tctgcatctacatgcaattctaaaggccacatttgtgctgaaggcacagtgtgggacaca
attcctgggactaaaacgagtatgtatgcacatcagcgggaaggtttagagttcatttgg
aagaatataggcgggagcatttaccttgaagaattgaagaacagtgcatgtgatggtgga
agcggatgcatcatctcccatgccccgggcacaggtaaaacccgtcttgccatagttttt
ctccagacattcatgaaattatatccagaatgccggcctgtaattgtcgctccaagaagc
atgcttctcacatgggaagaagagttcaagaagtggaaggttgggattcccttccacaat
ctgaatcaaccggagttttctgggcgggaaaatgaagcagccttaaatctgctaaataaa
gccggacgccaaggaaaaaatatgaattcagttcgtctggtgaaattgtattcatggaga
aagggtcagagtgtcctggggattagctataggctatttgagaagcttgctgaagatgga
attgtttccacaaatgacgaaggaggtagtaaaacgaaaagaaaatttaaacgatatgcc
gaagctgagatggttaggaaaatgcttctcgaacttccagggcttttggtacttgacgag
ggccacactcctcgcaatgaccaaagcttaatgtggcgagccctttcgggagtggaaacc
caaaggcgaatcctcttatctgggactccatttcagaataacttcgatgaactctttaac
acgctctgtctagttagaccgaagttttgtgacagaattgtcaccggaattaagggagat
tcccgaaggaatagagggagggaggggaggaaaggtagagggaaatgggcttctctgacc
aaatcaattggaaaggatgcgggtgataaactcaacgaactcagagccctgattgaccct
tttgtgcatgtgcataaaggtatgatacttaaggagaatctgccagggttgagggatgct
atggtcttcttaaatccaactgagtttcagaaaactctaattggagttattcaaggtcgg
cccaacgtattcaatcgggaccacctagcatctttgatttctgtccacccttccctcttg
ctaggacatgccttatctgatgaagaagggctctccattgatacaaacgagctagaaacg
cttcggtttgattctaaagccggtgtgaagaccaattttctaatggaactaatccgcctt
agtatggcggtgaaagaaaaggttttggtcttcagccagttcattgaaccactgactatc
atcagagagcagttgaaatcgagttttggttggacagaaggaaaagatttgttgtatatg
gacgggaagattgaggcaagacatcgccagtcgtcgatttctttgctgaatgatccggat
agtcaggttcaggtacttctggcatcaataagggcttgctctgaaggcataagtctggtt
ggggcatcaagagtagtcttgcttgatgttttatggaacccctcggtggaaaggcaagcc
ataagccgtgcatacaggatagggcagaagaaagtggtgtatatctaccgtttgatcacg
tcaggaacaatggagggtgagaagtgtgcaaggcaggccgagaaggacaggttatctgag
ttggtattctcttctgcggatggaaaacttcataggaaggaaaccatctcacgtgcagtc
aatgatgataagatactggaagagatggttcagcatgagaagatcagctatatgtttgag
aaaatactcaaccaaccggaagaatccaatttgatccacacttgtggttag
DBGET
integrated database retrieval system
