Rhododendron vialii: 131332308
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Entry
131332308 CDS
T09330
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131332308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131332308
03036 Chromosome and associated proteins [BR:
rvl03036
]
131332308
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131332308
Coactivators
SAGA/TFTC/STAGA complex
131332308
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131332308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
FapA_N
Motif
Other DBs
NCBI-GeneID:
131332308
NCBI-ProteinID:
XP_058222440
LinkDB
All DBs
Position
7a:38328579..38343501
Genome browser
AA seq
831 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDNTSTSQPSDSDTAALSKGIYRTS
SQLFPPWHTSSQDETANSRSQQNLNGSQQQAQHSSETDLKQHGSGPENQRQQIDNQLLDD
RRQRQAEQNTLHFSRPPSIHNSEKNPELPKINQHAAATEQKPGNPRGQVPFGLLLPLLTP
QLDKDRSMQLQTVFNKLKKNEISKDIFVQNMRSIVGDQMLKIAVYKLHAQGKQARNSQTG
PNQLSLQSQASAQEQHQKMQTVGPHQGNVPQSFAQLHQKGGTSDMSHIPSSASQLKSDSA
NSTMGKKPSFPIYGSAGNSYHPFSGSNVNASAASLKQQPHDSQMRQASVHQSIDANQNLV
HWQSSTGQEQKNGAQSSMAYVKQEPVDQGNEQQYKSLLSSPRGLSSFSPSQAHGNAMTGT
LKDDALEMHSARMGFSGITSTVPSNTASSSMTAQLDPNNSLSSRIPSALTPVGPGNNAKT
PPKRPPIGQKKPLESLGSSPPLSSKKQKVSGTFADQSIDQLNDVTAVSGVNLREEEEQLL
SGPKEESRVSEASRRVVQEEEERLILQKIPLQKKLAEIMSKCGVKSSSNDVERCLSLCVE
ERMRGLISNLIRLSKQRVDIEKPRHQTIVTSDVRKQILAINQKAREEWEKKQSEAEKLQK
LNELDGDAGVDGDKERDDGRVKTLKANKDEDDKMRATAANVAARAAVGGDDMLSKWQLMA
EQARQKREGGGVDVASGSQQGKEMSFKPSSTSAKNARDIEGGEKRVPSAASLAFGSSRKL
ARNQVVVPQTKATPSISIKDVIAVLEREPQMSKSTVMYRLYEKMRGDAVAE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggacccctccataatgaagctcctcgaagaagacgaggacgaaacgatgcattcaggg
gctgacgtggaggcgttcacagctgcacttaacagggacatagagggcgataatacctcc
acatctcaaccctctgattcagacactgcagctttatctaaaggaatctatcgcacttcc
agtcagttatttcccccatggcacacttccagccaagatgaaacagcgaattctcgaagt
caacaaaatctgaatgggtcccagcaacaggctcaacattcatctgagacggatctaaag
caacatggatctggtcctgagaatcagcggcaacagattgacaatcaattgctagatgat
cgtcgacaacggcaagcagaacaaaataccctccatttttctagaccacccagcattcat
aattctgaaaaaaatcccgagttaccaaaaattaaccaacatgcagcggcaacagaacag
aagcccgggaatccacgtggacaagtgccttttggcctgttgctaccactcttaacacct
caactagataaagacagatccatgcaacttcaaactgtttttaataaactgaagaaaaat
gaaatctccaaagatatctttgtccagaacatgagatctattgttggggaccagatgctc
aagatcgcagtgtataaattacatgctcagggaaaacaggctcgaaactcgcagactgga
cccaaccagttatcattacaatcccaagcttctgcacaagaacagcatcagaaaatgcaa
actgttggtcctcatcagggaaatgttccccagtcatttgcacaacttcaccagaaggga
ggcaccagtgacatgtcacatatcccgtcttctgcatcacaactgaaatctgattcagcc
aattcgacaatgggcaagaagccatcttttccaatttatggaagtgcaggcaatagttat
cacccattttctggatctaatgttaatgcttcagccgcatctctcaaacagcaaccccat
gattcacaaatgaggcaagcttcagttcatcaaagcattgatgcaaatcagaatttggtt
cattggcaatcatcaactggtcaagagcagaaaaatggtgctcaatcatcgatggcttac
gttaaacaagagcctgttgatcaggggaatgagcaacagtacaaatcacttctgtcttcc
cccagggggttgtcttctttctccccttcacaggcacatgggaatgcaatgacaggaact
ttaaaggatgatgcccttgagatgcattccgccaggatggggttctccgggattacaagt
acggtgccttctaatactgcatcttcttctatgacagcacagctggaccccaataactcg
ttaagttctcgaatcccatctgcacttactccagttggacctggaaataatgcaaagact
cccccgaaaaggcctcctattggtcagaagaaaccacttgaatcccttggttcgtcgcca
cctctatcaagtaagaagcaaaaagtatctgggacctttgcggatcaaagcatcgatcaa
ctcaatgatgtaactgctgttagcggagttaatcttagggaagaggaagaacagctgctt
tccgggcccaaggaagaaagtcgagtttcagaagcatctcgaagggttgtgcaagaagaa
gaagaaaggctgattttgcagaaaataccccttcaaaagaaattggcagaaatcatgtca
aaatgcggtgtgaaaagttcaagcaatgatgtggagagatgcttgtcactgtgtgtagag
gaaagaatgcgtgggctgataagtaatctgatcagactgtcaaagcagcgggttgatatt
gagaagccaaggcaccaaactattgtaacttcagatgttcggaagcagatcttggcgatt
aaccagaaagccagggaagaatgggagaaaaagcagtcggaagcagaaaaactccaaaag
ctcaatgaactagatggtgatgctggagttgatggtgataaggagagagatgatggtcgt
gtgaaaacacttaaggcaaacaaagacgaggatgacaagatgcgggccacagctgcaaat
gttgctgcccgagctgctgttggaggggatgatatgctgtcaaaatggcagctaatggct
gagcaggcccgacagaaacgtgaaggagggggagtcgatgtggcttctggttctcagcag
ggcaaagaaatgagtttcaagccttcatcaacctctgcaaaaaatgcaagggatattgaa
ggaggagagaaaagagtcccctcagctgcttctttggcatttgggtcgagtaggaaattg
gcgaggaatcaagttgtggtgcctcaaactaaagccactccctctatctcgattaaggat
gttattgctgtcctcgaaagggagccccagatgtcgaagtctacagtgatgtatcgcttg
tatgaaaaaatgcgtggtgatgctgtagctgaataa
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integrated database retrieval system
