Rhododendron vialii: 131332447
Help
Entry
131332447 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131332447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131332447
03036 Chromosome and associated proteins [BR:
rvl03036
]
131332447
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131332447
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131332447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Antimicrobial10
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
131332447
NCBI-ProteinID:
XP_058222651
LinkDB
All DBs
Position
7a:complement(24350043..24360973)
Genome browser
AA seq
713 aa
AA seq
DB search
MPGLTSDPGETSLVPFSSEVGPVVYPLRHGLKHPIAARFSISWSRGNSLRVSGFQSEADD
GEVVRGKVVELKLGSGDGEIDHAQWRRIAYGSVSPFALLQSRKNSMAAVSKLSAVSSPYD
AEWSDYVMEYSRDIGFLLGGHKLSLSVGIEDTKTVLKKVEEPTCLKAAWELMVIFYADHK
SQAWTPEQLVDWLADYDSLLSGTQPTVHSKLVNFQKELTSLQAIEDDDKYWEAISSALAV
GWLDVAVKMLRLHGSYQLNQVGSREIENGLVEAVAVLISKMPRMRLELAPRKFGECFGTK
PDFIKAWEKWRGQISKLDCSAFWVQCDHRQTREGLKNLLQIMLGNANILSSATCHWMELH
VSYLLHIRPFTMGLESMNNLAQKCMQFKPVSFPHKLMTLLLGILGENTEVVLAECSRSFG
PWMVVHAAELLAAGNTQAEILLHEERHNLRGISMEELHRLVYAQVLSSHALTWQIAPIYL
ASCTKQGMALLKILLYKQPMHHNQILLKNIEICRLYELHKVSSKMMKIAGVHHWKHGKKG
SGVFWLQQARDEIRLSTIAQQLFDFVGKSISEESFKQWEGLIELLGSESRIAGGLEFLHK
YRDFKRSLQQVHDGIATNSAQKAAESLILLMKNPSTPQRFWLPLLYDSLKLLNWQEHPLL
NVSQTNLLLNKLQELSIVARLRPDFTEADLPSQALSSVRLALATNLGRAILEE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctgacgtcagatcccggcgaaacctctctcgtcccattctcgtctgaagtc
ggccccgtggtgtacccgctccgccacggcctcaagcatccaatcgctgctcgcttctct
atctcttggtcccgtggcaactccctccgagtgtcgggttttcagtccgaagccgacgac
ggtgaagttgttagggggaaggtcgtggaattgaagctcggcagcggagatggcgagatc
gaccacgcacagtggcggaggatcgcctacggttcggtctctccgtttgcgcttcttcag
agccgtaagaactcgatggcggccgtgtcaaaactgtcagcggtctcgtctccatatgat
gccgagtggtcggattatgtcatggagtatagccgtgatataggttttcttcttggaggt
cacaagttgtcattgagtgtagggattgaagacacgaagacagtattaaagaaagttgag
gagccaacctgcttgaaagctgcatgggagttgatggtgatattttatgcagaccacaaa
tctcaagcttggactcctgaacagcttgttgattggttagcggattatgatagcttactg
tcaggaactcagccaacagttcattcaaaacttgtcaactttcaaaaggaacttaccagt
ttgcaggcaattgaagatgatgataaatactgggaagcaatatcatcagctttggcagtt
ggctggctagatgttgcggtgaaaatgttacgtttgcatggatcttatcagctgaatcag
gttggaagccgtgagatagagaatggactggttgaagccgttgctgttctgatttcaaaa
atgccacgtatgcgtcttgaattggcgcccagaaaattcggtgaatgctttggaaccaag
ccggattttattaaggcatgggagaaatggcggggacaaataagtaagctggattgcagt
gccttctgggttcagtgcgatcaccgtcagaccagagagggcttgaagaatttgttgcaa
atcatgctgggaaatgctaatattctctcctctgcgacatgtcattggatggagctgcat
gtttcgtacttgttacacattaggccatttactatgggtttagagagcatgaacaaccta
gctcagaaatgcatgcagtttaagccagtgtcttttccccacaagttgatgacacttttg
cttggaattctaggagaaaatacagaggttgtcttagcagaatgttctagatctttcggc
ccttggatggttgtccatgctgcagagttgttggctgctgggaacactcaagcggaaatt
cttttgcatgaagagcgccacaatctcagaggaatttccatggaggagcttcatcgactt
gtctatgctcaagttctctcttcacatgcattaacttggcaaattgctcctatatatttg
gcatcatgtacaaaacaaggaatggccctgttgaaaattttgttgtataagcaacccatg
caccataatcaaatactcctcaagaacatagagatttgccgtttgtatgaacttcacaaa
gttagttcaaagatgatgaagattgctggagtgcaccactggaagcatggtaagaaaggc
tctggagtcttctggcttcagcaagctcgggatgaaattcgtttaagcacaattgctcag
cagttatttgattttgttggaaagtctatctctgaagaaagtttcaagcaatgggaagga
ttaattgaattgctgggttcagagtctaggattgctggaggtcttgagtttttgcacaag
tatcgggatttcaagagatcccttcagcaggttcatgacggaattgctaccaacagcgct
cagaaagctgctgaatcccttatattgcttatgaaaaacccttctacaccgcaaaggttt
tggctgcctcttctatatgactcgttgaaattattgaattggcaggagcatcctctctta
aatgtctctcagactaaccttttgttgaataagctgcaagagttgtctattgtggcaagg
ctgcgcccagacttcacagaagcagacttgccatcccaggccctgagttctgtcaggtta
gctcttgcaactaatcttggacgtgctatcctggaggaatga
DBGET
integrated database retrieval system
