Rhododendron vialii: 131333134
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Entry
131333134 CDS
T09330
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131333134
09122 Translation
03013 Nucleocytoplasmic transport
131333134
03015 mRNA surveillance pathway
131333134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131333134
03041 Spliceosome [BR:
rvl03041
]
131333134
03009 Ribosome biogenesis [BR:
rvl03009
]
131333134
03012 Translation factors [BR:
rvl03012
]
131333134
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131333134
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131333134
mRNA cycle factors
Stress granule specific factors
131333134
Spliceosome [BR:
rvl03041
]
Complex C
Other components
EJC/TREX
131333134
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
Helicases
131333134
Translation factors [BR:
rvl03012
]
Eukaryotic type
Initiation factors
eIF-4
131333134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
tRNA-synt_2
DUF6762
Motif
Other DBs
NCBI-GeneID:
131333134
NCBI-ProteinID:
XP_058223472
LinkDB
All DBs
Position
7a:19634445..19672921
Genome browser
AA seq
247 aa
AA seq
DB search
MIKQRTLWTRAIKMLVLIVRYLPPELLLVYDNFVVLISATLPNEILETTSKFMNDPIRIL
VKRDELTIEFFVAVEREEWKFDTLCDLYDTLTITQAVILCNTMRKVDWLTEKMPSNNFTV
SSMHGDMPQKERDATMKEFRDRDTHVLITIDVWARGLDVQQIFKQFLLSEGFVGIHTPKL
IAGSNEGGSAMFRLDYKGQPACLVQSPQPHKQMAICGDFGRVFEVGHGFRAKDSFTHPQT
FVQVYRF
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcagagaacattgtggactagagctatcaaaatgttggttcttatagtcaga
taccttccaccagagcttctactggtttatgacaattttgtggttttgatatctgctacc
cttcctaatgaaattttggagacgacgagcaaatttatgaatgatcctattaggattctt
gttaaacgtgatgagttgactattgagttcttcgttgcagtagaaagggaggagtggaag
tttgatactttgtgtgatctttatgatacccttaccatcacccaggctgttattttgtgc
aacacaatgcggaaggttgattggctaactgagaagatgcctagcaacaactttactgtc
tcttctatgcatggagatatgccccagaaggagagagatgcaacaatgaaagagttccga
gatcgtgacacccatgttctaatcactattgatgtttgggctcgagggctggatgttcaa
cagatattcaagcagttcttgctatctgaaggctttgtggggattcatacgccaaagttg
atagcaggctctaatgagggcggctcagctatgttcaggctggactacaaagggcaacct
gcatgtctagttcagtcacctcagcctcacaagcaaatggcaatttgtggtgattttggc
cgtgtttttgaggtaggtcatggtttcagagcaaaggattcctttacccacccacagaca
tttgtacaagtttacaggttttga
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integrated database retrieval system
