Rhododendron vialii: 131333250
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Entry
131333250 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131333250 isoform X1
KO
K24155
rabconnectin-3a
Organism
rvl
Rhododendron vialii
Pathway
rvl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131333250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131333250
Membrane trafficking [BR:
rvl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131333250
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
131333250
RAVE complex
131333250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
Dicer_dimer
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
131333250
NCBI-ProteinID:
XP_058223665
LinkDB
All DBs
Position
7a:399729..417610
Genome browser
AA seq
2536 aa
AA seq
DB search
MQDRRSSTTTATTTTASNATPIESDNSSTAVDFADKLPLQLIQSETIPPAPIRSESAVDW
LPDFSGYSWVAYGASSLLVISHFPSPLSQEETLIGPIFRQVFQLSTDASALVSSVSWSPA
MPSVGDLAVSLDNCIGLFSHNSAVSDGSFSWSQNAVLVQSTKVETIKWTGSGDGIISGGV
EVILWRKNSTSWQIAWKFKTELPQTLVSTTFSIEGPSATASLNTRHAEESSSGASEASKC
VFVCYGDGKSNYMKAELCHPMPVSMIQWRPLIGSQSTLDIRHPLRHVLLTCCLDGTVRLW
SEINDGRVRRIGKDISDQKSTRRSFHVAAVIEINQTMDGTLGSDIFVRWAADIDGVLTAG
IAASQYFTSGGHYQHEKAGRCEWLVAFGPHMLVTFWAIHCLDDISPMRYPRVTLWKSQEL
TGAKLGTSDILLNKVVILRNEHFGPPNLCSLLWLSPSNSLCWSQCYTHISTNAEGCLDKS
GKENILSCNAGAIVNINGHTGKVIQVAVHANRLETELAVSLDTNGLLLFWSVSTISNSIT
GLPTLNPTWKLSGKLVMQTKYSSLTWAPSVLDEDTLLLMGHDQGIDCVMIKISRNEEEKM
LCHNFCTIPFTDHCHGNRPTNIYSIPLPSSCKETFSVNNFLLLAVWKESFQALSWKIGIH
SCDLDGSACGCNFDSGNAVTDGSWAFKSNFAGKRYWIDVDPCSSLLPDPHNKDEIISFAV
VCPSISVLSEKQNCIPVDELCYNSWAYHMATGCANGSLKLWRSMSVKQMNSKMQWELVGI
LAAHQGPITSISLTDCGRKIATFCPGPSNTSSTVHIWETVHLASTGKFLLEDTLSLDGEV
IASNWLTLGSGQVILGVCLQNELRFYAERLSGAQPLMKPGKSLEGNNWLCIAFAHTHPDI
RNFLWGPRATAVVVYDSYFSLFSQCLLFADEKHQAKCNSGISRNNLIYGDSRPHNDMLDA
IFVAYDICESKESTAEDNQEEGLSTLPMKMNITNDVLSSIFLASAQQKYSLDTKIDFCSV
QGVAEKLRGSPVVYHPEALLMNIATGNWERAFVVLRQLVEYFSSSDASVTGYAKSKHAIP
LVHLSNYLERVPSTKVSDKAFHWSEDASLQIPKSLNQFTNSWQSYTSGHTFTSSSAESEL
SACFEAAQKLYDMTAISNTEKIQILAIVDLLCEVVNRQSASAYNSLDEPGRRFWVAVKYQ
RLYFCQKFSRSASLSELAVDSGLFVWAFHSDCQENLFSSLLPSEPSWQEMRNMGVGFWYT
NAAQLRLKMEKLARQQYLQSKDPKACALLYIALNRIQVLAGLCKISKDEKDKPLVGFLSR
NFEEDKNKAAALKNAYVLMGRHQLELAVAFFLLGGDASSAVTVCAKNLGDEQLALVICRL
VEGCGGALERHLILNFLLPSAIGKGDSWMASFLEWVLGNYAQSFLSILGVQKDSPINSSA
LVYNHTPFLDPSIGQYCLMLVTKNSFKNAVGEHDAAVLGRWAILMSTTALNRCGLPIEAL
ECLSTSLSRIGVSDQGSMSDIEKTEVPNKMLMPFPYNSSHNWISGDVSFHMETHAKLDLS
MQYISKLLREHPSWPESKCSEYGIQQYNMLLENYYKKLMGTLAYLERKFSLNPCHLIDMI
VIFLSNNGLSLIGYHILHAYASQYSSQDKRPLFKGFLMYPIEPMLLLKATEEMSCLFSRY
VVSCFITCSQPKPCSTDNNAAGENRFGFLAAWKFYLQGLISSLWRLRAILKLSSGFCGED
DIRKTCVILDLSEFCAYLASAWLQRSCKALILVVKPLLLTCSKGHAPNEIAMSDLKMLLH
QTKELLAEKTLSDNMGSAVGVTKATQDSQGEVIISTIPEEVRWLIIRAALWGHVSSFLTD
HLNSLFENREDKYSFAPFYRLSSSMSSMCEVDGINAPNQMRLVSVVLAKLLKTTCALISS
SSTKQLASFLLQKMEDGSNEPTLTWLEGFSESSPRALNKHLSHGFDSQNVVNIGNDLSAS
ELLWNFFSDPKVISERLEQQSFKWRQYTKPKPPKEWSNMFVSVYGEFIAEEKQRGGFEAS
ETGSHLRGPSPPDSNSFPSSVQPNMMLTEKLLPFQNPKEVCRRNGELLEALCINSIDQKQ
AALSSNKKGIIFFNWDDGLPLRDHSNYIWAEADWPHNGWAGSESTPVPTCVSPGIGLRSK
KGAHLGLGGATVGVSSLAGPGKDLAGGVAFGIPGYAGMGASGLGWGIQEDFEELTDLPAT
VENVNTRAFSSHPSRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISA
VQFDQCGQRFATAALDGTVCTWQLEVGGRSNICPTESSICFNNHASDVTYVTASGSIIAV
AGYSSNGVNVVIWDTLAPPSSSRASIICHEGGARSLSVFDNDIGSGSVSPFIVTGGKDGD
VGLHDFRYIATGRAKRQRHFGCGEPDNNASLTADGMLWYIPKAHLGSVTKISTIPNSSLF
LTGSKDGDVKLWDAKTAKLVIHWSKLHERRTFLQPSSRGFGGVVRAGITDIQVISHGFLT
CGGDGSVKLVQLKGFS
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacagaagatccagtaccaccacagccaccaccaccaccgcctccaacgccaca
ccaatcgaatcagacaactcatccacggccgtcgatttcgctgacaaattgcctctccag
ctcatccaatccgagacaatcccgcctgcgccgatccgatccgaatccgccgtcgactgg
ttaccggacttctccgggtactcatgggtcgcctacggagcctcctctctcctcgtgatc
tctcacttcccctcccctctctcccaagaagaaacactcatcggtcccattttccgccag
gtcttccagctctccaccgacgcttcggccctggtttcttcagtctcatggtcccctgcc
atgccttctgttggtgacctcgctgtttctttggataactgtatcggcttgttttcccat
aattcagccgtttctgatggttctttttcttggagccagaatgcagtgcttgtgcaatct
acgaaagtagaaaccatcaaatggacgggctctggcgatgggataatttcaggtggtgtt
gaggtgatcctgtggagaaagaacagcacgtcctggcaaatagcttggaagtttaaaaca
gaactgcctcaaactctggtttctacaaccttctctattgaagggccatcggcaacggct
tctttgaatacacggcatgctgaagaatcctcatctggagccagtgaggcaagcaaatgt
gtgttcgtgtgttatggtgatggaaagtctaattacatgaaagcagagctatgccatcct
atgcctgtttctatgattcaatggaggcctctaataggaagccaatcaacactagacatt
agacatccactgaggcatgtattgctaacatgctgcctagatggaactgtaaggttatgg
agtgagattaatgatgggagggttagaagaattggcaaggacatcagtgatcagaaatcc
acgagaagatcattccatgttgctgcggtaattgagattaaccaaacaatggatggaact
ctgggctctgacatatttgttcgatgggcagcagacattgatggtgtgctcacagctggt
atagcagccagccaatattttacatcaggaggtcattatcagcatgagaaggctggaagg
tgtgaatggttagttgcatttgggcctcatatgttggtgacattctgggccattcattgt
cttgatgacatttccccaatgaggtatccacgagtgactttatggaagagtcaagaatta
acaggtgctaaattgggaacaagtgatatactactaaataaagttgttatcctcagaaat
gaacactttggtccaccaaacctgtgctctttgctttggttgtctccaagtaattcctta
tgctggtcacagtgttatactcatatatcaactaatgcggaggggtgcttagataaatct
gggaaggagaatattttgtcatgtaatgccggtgcaattgtaaatataaatggtcatact
gggaaagttatacaagttgcagtgcatgctaataggcttgaaacggaacttgctgtttct
ttggataccaatggattgcttttattttggtcagtttcaaccatttctaatagcattacg
gggctgccaactttgaatccaacgtggaaactttctggaaaacttgtaatgcagaccaaa
tattcaagcttgacgtgggcaccctcagttttagatgaggacacacttcttcttatggga
catgatcaaggcattgattgtgtcatgattaagatcagcagaaatgaagaagagaagatg
ctatgtcacaacttttgcactatcccttttactgatcactgtcatggaaacaggcccacc
aatatctactcaattcctttgccttcaagctgtaaggaaacttttagcgttaacaatttt
ctgctcttagcagtatggaaggagagctttcaagctttgtcgtggaaaattggcatccat
tcctgtgatttggatggaagtgcttgtggatgcaatttcgactctggaaatgctgttaca
gacggttcttgggcattcaaaagtaattttgctggtaagagatattggattgatgttgat
ccttgctcttcgttattgccagatccacacaataaggatgagatcattagttttgccgtt
gtttgtcctagcatttctgttctatctgaaaaacaaaattgcattcctgttgatgaattg
tgctacaattcttgggcatatcacatggccacaggctgtgccaatggtagtttgaagcta
tggagaagtatgtcagttaagcaaatgaactcgaaaatgcagtgggaactagttggtata
cttgctgcacatcaagggcccatcacatcaatatctctaactgattgtggccgaaagata
gcaaccttctgcccaggcccttcaaatacttctagcactgttcatatatgggaaactgtg
caccttgcaagtacaggcaaatttttacttgaagatacattatctcttgatggagaagtt
attgcttcaaattggttaactctggggagtggccaggtcatactcggagtttgcttacaa
aatgaattgcggttttatgcagaaagactgagtggtgcgcagcccctaatgaaacctgga
aagtctttagaaggaaacaattggttatgtattgcatttgctcatacgcaccctgatata
cgcaatttcctctggggccctagagccacagctgtggttgtttatgatagctatttttct
ctcttcagtcagtgcttattattcgctgatgaaaagcatcaggctaagtgtaattcagga
attagcaggaataatctcatttatggtgacagtagaccacataacgatatgcttgatgca
atttttgttgcttatgatatttgtgaatccaaagaatcaacagcagaagacaatcaggaa
gaagggctgtccacactccctatgaagatgaatataacaaacgatgttctatcaagcata
tttttagcaagtgctcagcagaagtatagtttggataccaagattgatttctgtagtgtg
caaggtgtcgctgagaagttacggggatcgccagttgtctatcatcctgaggcacttcta
atgaatattgctacaggcaactgggaacgtgcattcgtagttctacgacagcttgttgaa
tatttctcctctagtgatgcttctgtgacaggatatgctaaatctaagcatgccattcca
ctggtccacctgtcaaattatcttgaaagagttccgtcaacaaaagtgagcgataaagca
tttcactggagtgaggacgcctccttgcagattcctaaaagcttgaaccaatttaccaat
agctggcagtcttatacttctggtcacactttcacttcatcttcagcagaatctgaactt
agtgcatgctttgaagcagctcagaagttatatgacatgacagctataagcaacacagaa
aagattcaaattcttgccattgttgatcttctctgtgaagttgttaatcgacaatctgct
tccgcttataacagtcttgatgaacctggccgaaggttttgggtggctgtgaagtatcaa
cggctatatttttgccaaaaattttctagatctgcatccttgagcgagttggctgttgac
tccgggctatttgtttgggctttccactctgattgtcaagagaatttgttcagttccctt
ctgcctagtgaaccatcttggcaagaaatgcggaatatgggtgttggattttggtataca
aatgcagcacaattgcgattgaagatggagaagctggctagacaacaatatttgcaaagt
aaggatcccaaagcttgtgcacttctatatattgcactaaacagaattcaagttttggct
ggtctctgtaaaattagcaaagatgagaaggacaagccattggtgggatttctttcacgt
aattttgaggaggataaaaataaagcagctgctttgaaaaatgcttatgttttaatggga
agacatcagctggagctggctgttgctttctttttgcttggcggtgatgcctcttctgct
gttactgtctgtgcaaaaaatctcggtgatgagcagcttgctcttgtaatttgtcgcctt
gttgagggttgtggtggggcattagagcgtcatcttatactaaatttcttgcttccatct
gcaattggaaaaggcgactcctggatggcaagctttctagagtgggtattagggaattat
gcacaatcctttttgagcattcttggtgttcaaaaggattcacccatcaatagctctgcc
ctcgtatacaatcatactccttttctggatccaagcatcggtcaatactgcctaatgttg
gtaaccaaaaatagtttcaagaatgctgttggagagcatgatgctgcagtcctgggtagg
tgggcaattttgatgagtactacagcccttaacagatgtggcctgcctatcgaagctttg
gagtgcctttcaacttctctgagcagaattggggtttcagatcaaggaagcatgtcagat
attgagaaaactgaagttccgaacaagatgctaatgccatttccatacaattcctcccat
aactggatatcaggagatgtgtctttccatatggagacacatgctaaattagatttatca
atgcagtacatttcaaaactgttaagagagcatccaagctggccggaaagcaaatgctct
gagtatgggattcaacaatacaacatgttacttgaaaattattacaagaagttaatggga
acgcttgcatatcttgagcgaaaattctctttgaatccttgccatctgattgacatgatt
gtaatattcctgtcaaataatggattatcccttattggataccatatattgcatgcctat
gcttctcaatactcctcacaagataagaggcctttgttcaaaggtttcctcatgtatccc
atcgaacccatgctacttttgaaggctactgaagaaatgtcctgcttattttcaagatat
gttgtttcctgttttataacttgctctcagccaaaaccatgctccactgataataatgct
gctggtgaaaatagatttggctttctggcggcttggaagttctacttgcaaggtctcata
tcgtctttgtggaggttgagagccatattaaagttgtcttctggtttttgtggtgaagac
gacatcaggaaaacttgtgtcattcttgatttgtctgagttttgtgcatatcttgcatca
gcttggcttcaaaggagttgtaaagctcttattctggttgtgaaaccccttttgctcaca
tgttcaaaagggcatgctcctaatgaaatcgccatgtctgatctgaagatgctccttcac
cagactaaagagttgctggctgagaagacactgagtgataacatgggaagtgctgtcggg
gtgacaaaagcaacacaggacagtcaaggtgaggttattatatctacaataccagaagaa
gtgagatggctaatcattagggctgctttgtggggacacgtatcttcttttctgacggat
cacctgaactcattatttgagaatagggaagataaatattcttttgctccgttttataga
ctttcctcctctatgtctagcatgtgtgaagttgatgggattaatgcacctaatcaaatg
aggctggtttctgtggttttggccaagttattgaaaactacatgtgcactaatttcttct
tctagtacgaagcagcttgcatcatttctgctgcagaaaatggaggatggatccaatgaa
ccaactcttacgtggttagaaggtttcagtgagtcaagtccaagagctctcaataagcat
cttagtcatggttttgacagtcagaacgtggtgaacattggaaatgacttgtcagcatct
gagctcttatggaattttttttctgatcctaaagttatatctgaaagacttgaacaacag
agctttaaatggcgacagtatactaagccaaagcccccaaaagaatggagtaacatgttt
gtgagcgtctatggggagtttatagctgaggaaaaacaaagaggtggttttgaggctagt
gaaactggatcacatttacgaggcccatctcctccagacagtaattcttttccaagttct
gtacaaccaaatatgatgcttactgagaagcttttgcctttccagaaccctaaagaagtt
tgtaggagaaatggagaacttttagaggcattgtgtatcaactctattgatcaaaagcaa
gctgctctttctagtaacaaaaaggggataattttctttaactgggatgatggcctacct
ctaagagatcattctaactatatctgggcagaggcagattggccacataatgggtgggct
ggatcagaatctaccccggtccctacttgtgtgtctcctggcatcggacttagaagcaag
aagggggcacaccttgggttgggtggagcaaccgttggcgtaagttctttggcaggacca
gggaaagatttagcaggtggtgtagcatttggaattccaggttatgctggtatgggtgca
tccggccttggttgggggattcaagaggattttgaggagctcactgatctacctgccact
gtggaaaacgttaacacaagagcattctcgagccatccttctaggcctttctttttggtt
ggatctagtaacacgcacatttacctatgggagtttggcaaggacaaagcgactgcaaca
tatggtgtgctccctgctgcaaatgtacctccgccgtatgctcttgcatctatatcagct
gtgcagtttgatcagtgtggacagagatttgccactgctgcattagatggaacagtatgc
acatggcagcttgaggtgggaggaaggagcaacatctgtccaacagaatcatctatctgc
tttaacaaccacgcatcggatgtcacttatgttactgccagtggatcaatcattgctgtt
gctgggtatagctccaatggcgttaatgtggttatatgggatacacttgcaccaccctca
tcttctcgagcttccatcatttgtcatgaaggtggcgcccgctcgctttcggtattcgat
aatgacattggaagtggttctgtttctccattcattgtgactggcggtaaagatggtgac
gttggacttcatgatttccggtacatagctactggaagggcaaaaaggcaaagacatttt
ggttgtggtgaaccagacaacaatgcatctttgaccgctgacgggatgctttggtatata
ccgaaggctcacttagggagtgtcaccaaaatatctaccataccaaattccagtttattc
ttgactggaagcaaagatggagatgttaaactctgggatgcgaaaacggccaagttagta
attcattggtcaaaattgcatgagagacgcacctttctgcaacctagttcacggggcttt
ggtggagtcgttcgggctggcattacagatattcaagtgatttctcatggttttctgaca
tgtggtggagatggttctgtaaagctggttcagctcaaaggtttttcttaa
DBGET
integrated database retrieval system
