KEGG   Rhododendron vialii: 131333430
Entry
131333430         CDS       T09330                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
rvl  Rhododendron vialii
Pathway
rvl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    131333430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rvl03009]
    131333430
Ribosome biogenesis [BR:rvl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    131333430
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_WDR75_2nd NBCH_WD40 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_LRRK2 VPS8_N WD40_like VID27 Beta-prop_IP5PC_F Utp12 WDCP
Other DBs
NCBI-GeneID: 131333430
NCBI-ProteinID: XP_058223933
LinkDB
Position
7a:complement(7001023..7015821)
AA seq 908 aa
MGIFEPFRAIGYITSSVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPLMPKKIR
ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHTAKVNLLLLFGEHILSVDVSGNIFIWAF
KGIDQNHAPLGHVLVEDKFSPTCIMHPDTYLNKVILGSQEGSFQLWNISTKKKLYEFKGW
QSSICCCVSSPALDVIAVGCADGKIHVHNIRFDEEVVGFTHSTRGAVTALSFSTDGQPLL
ASGGSSGVISIWNLEKRRLQSVIKEAHDSPIISLHFFANEPVLMSSSADNSVKMWIFDTS
DGDPRLLRFRSGHSAPPICIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLRVKEEDIKLKPVIAFDVAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILKPC
PENPTSVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYVDVLEKNSYAHSGEVVGV
ACDSTNTLMISAGYHGDIKVWDFKGREQKSRWEIGCSLVKIVYHRVNGLLATVADDLVIR
LFDVVALRLVRKFEGHTDRITDLCFSEDGKWLLSSSMDGSLRIWDVILARQIDAIHVDVS
ITALSLSSNMDVLATTHVDQNGVYLWVNQAMFTGAPNVESYGSGKEVVNVKLPSVSSTEG
SRDNDSEKPVITHSEVAYSSHTPLSVRQIPDLVTLSLLPKSQWQSLINLDIIKARNKPIE
PPKKPEKAPFFLPSIPSLSGEIMFAPIESANEEKDSNGDKREKREEQAHLASSRFVQFLH
TSADLENFSAFTDYIKSLSSSTLDMELRMLQIIDDDDEQEPEKRPEFHSIELLLDYFIYE
ISCRNNFEFFQAVIRLFLKIHGETIRQQPKLQEKARKLLEIQGAVWQRVDRLFQSARCMV
TFLSNSQF
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgggaatattcgagccgtttagagcaatcggatacattacaagcagcgttcctttctct
gtgcaaagattaggcaccgagaccttcgtcaccgtcagcgtcggcaaagcatggcagatt
tacaactgtgcgaagctgaatttggtgctcgttggtcctctaatgcctaagaagatacgc
gctcttgcttcctatcgggactacacgtttgctgcttacggcaatgacattgcagttttt
aagcgtgcacatcaggtggcaacttggagcaggcatactgcaaaggtcaacctgttgctt
ctgtttggggagcacatcctaagtgttgatgtcagtggcaatatttttatctgggctttt
aaaggaattgaccagaatcatgctccacttggacacgttttggtggaagataaattcagt
cctacttgtataatgcatccagatacttacctaaacaaggtaattctagggagccaggaa
ggttctttccaactttggaatattagcacaaagaagaaactttacgagttcaagggctgg
caatcttccatatgttgttgtgtttcatcaccagcgctagatgttattgcagttggatgt
gctgatggaaagatccatgtacacaacattcgttttgacgaggaagtagttgggtttaca
cattccactcgaggggctgtgactgcattatctttcagcactgatggacagccactccta
gcatctggaggttcatctggtgtcataagcatatggaatcttgagaagaggcgtctccag
tctgtcattaaagaggctcatgatagtccaataatctcattgcatttctttgctaatgag
ccagtgctaatgagttcatcagcagacaactcagtaaagatgtggatttttgacacaagt
gatggggatcctcgcttgttacgcttccgaagtgggcatagtgctcctcctatttgcata
aggttctatgctaatgggagacatattctgtcagctgggcaagatcgtgccttccgtctt
ttctcagtcatccaggatcagcaaagcagagagctttcccagcgtcatgtatccaaaaga
gcaaaaaagctcagggtcaaggaggaagatataaaactgaagcccgttatagcctttgat
gttgctgaaataagggagcgtgattggtgcaatgtggtcacatgccatatggatactgca
caagcgtacgtgtggaggcttcagaactttgttcttggcgagcacatcctgaaaccatgc
ccggaaaatccaacatctgttaaggcctgcaccatcagtgcctgtggcaatttcgctgtg
ctaggtacagctggtggttggattgagagatttaatcttcagtctgggatcagccgtggc
agttatgtggatgtgttagagaaaaatagctatgcccacagtggagaggtggttggtgtt
gcctgtgattccacaaacaccttgatgataagtgctggatatcatggggatataaaggtg
tgggatttcaaaggacgtgagcaaaaatccagatgggaaattggttgttcactggtgaag
attgtttaccatcgtgtcaatggtcttttggcaacagtggcagatgatttagtcatccgt
ttattcgatgttgtggcactaagattggttcgtaaatttgaaggtcacacagaccgtatt
acagacttgtgcttcagcgaggatggcaaatggcttttgtcatccagcatggatgggagt
cttcgaatttgggatgtcatcttagcaagacaaatagatgctatacatgttgatgtttcc
ataactgcactgtctttgtcatcgaatatggatgttctagcaacgactcatgttgatcaa
aatggggtctatctctgggttaatcaagcaatgtttactggagctcctaatgttgagtcc
tatggaagtgggaaggaagtagtgaatgtaaagttgccatctgtctcttcaacagaaggt
tctcgtgataatgactctgagaagcctgttataacacactcagaagttgcctacagttct
catactccgctttcagttaggcaaattccagatctcgttactctctcattattgcctaag
agccagtggcaaagcttgatcaatttagacattatcaaggctcgcaacaaaccaattgag
cctccaaagaaacccgaaaaggctcctttcttcctgccttcaataccatctctatctgga
gaaataatgttcgcacctattgagtcagctaatgaagagaaggatagtaacggtgataaa
cgtgaaaaaagagaggaacaagctcatttggcgtcatcccgctttgtgcaatttcttcac
acctcagcggacttggaaaatttttcagcattcactgattatattaaaagcttgtcttcg
tcaactttggatatggaacttagaatgcttcagattatagatgatgatgatgaacaagaa
cccgaaaagagacccgagttccattctattgaattgctgctggattatttcatttatgag
atctcctgcagaaataacttcgagttctttcaagctgtcatcagattgtttctaaagatc
catggtgaaacaatccgccagcagccgaagttgcaagaaaaggcacgaaagcttctagaa
atacaaggagcggtatggcaaagggtagacaggttgttccaaagtgctagatgcatggtt
acgtttctcagcaactctcagttttga

DBGET integrated database retrieval system