Rhododendron vialii: 131333594
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Entry
131333594 CDS
T09330
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131333594
Membrane trafficking [BR:
rvl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131333594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
131333594
NCBI-ProteinID:
XP_058224177
LinkDB
All DBs
Position
7a:complement(12710650..12720718)
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AA seq
1496 aa
AA seq
DB search
MATAPPFQVEDQTDEDFFDKLVDDDDDGEFKPAAPAENGSDSDEAKTFANLSIGEEKGEA
VRGDLNGASSDGNVEESRRSLPLSDSFVFDSGVEPDGVVLGTNTVGSLASSDSFVFDSVI
ESNDMDIGTEEVISDSAIRKSNESAGSGVKEVQWAAFNADSGEHASNGFGSCSDFFSELG
DGAVDPLGKVEDNFGTQSKIVSSNEEVKTMHGDDEYGDAQYQENVKAYEAGIGQSGDELG
INGSQYLENQSYGAGIGQAADGQDLNSSQSLEDLYPGWKYDPNTGQWYQIDGYDAANNIQ
GSFNSKSSENWAVSDGNSQASYLQHTAQSAIGTVTESGAKENIANWNQLSHGNVTTESVT
YWDQASQETGGAESVSSWNQVSQGNNGYPAHMVFDPQYPDWYYDTIAQEWQSLETYISSV
QSTSQAQGLPNQNGFASTGTFSHENDQKSYVDYGQVNASSGTFSHENEQKSYVDYGQVNN
HQLQGFGAQSQESNWTGSSSNYNQPGLNMWQQPANVGKSEAPVNFSGKQQWEDDHSSHYS
MSNHVSQQNTYESRGTVPSYDNKATQSSTHGFVPSWNFSQQLNQPSMQQYEQMHVSKDYS
GNQSIISDSQQQFQTGHQLSFDPNGGRSSAGRPPHALVTFGFGGKLIVMKDSSLSASSYG
SQGPLGGSISVLNVMEVVTEKTDSSSGGGALEYFNILSRQSFPGPLVGGNVGSKELNKWI
DERIAVCKSPEVDYRKGEILQLLLSLLKISYQYYGKLRSPFGSDTSKESDVPEAAVARLF
TSAKRNGEQFCDYGALAHCLQKLPSEGQMQATAAEVQTLLVSGRKKEALHCATEGKLWGP
ALVLAAQLGDQFYVDTVKQMAVCQLVSGSPLRTLCLLIAGQPADVFSADTTSDSSIYGAV
NMSLQPSQLQGGTTGMLDNWEENLAVITANRTKDDELVLIHLGDCLWKDRSEIIAAHICY
LVAEATFEPYSDSARLCLIGADHLKFPRTYASPDAIQRTELYEYSKLLGNAQFVLLPFQP
YKLIYAHMLAEVGKVSESLKYCQAVLKSLKTGRLPEVDMWRKLVSSLEERIRTHQQGGYS
TNSAPAKLVGKLLNLFDNTAHRVVGGLPPPVPSMSQGGAQANEHYQTMGPRVSTSQSTMA
MSSLMPPESMEPISEWTAGGTRMTMHNRSVSEPDFGRTPRQVHSSTEASSSSAQGKASAS
RFGRFSFGAQLLQKTVGLVLKPRQDRQAKLGEQNRFYYDEKLKRWVEEGAEAPAEEAALP
PPPTIPEFHNGMSDSNFRSASKDDGPSNNGNLEYKSTSPLQHSSGIPPIPSASNQFSARG
RTGVRSRYVDTFNKGGGNPTNLFQSPSVPSVRPASGANPKFFVPSPVSSSEQTLDTTDNV
QETTATNESSSIPTANNSFHSPPTSMTMQRFPSMDNILNNRTVTNGSVSLSSHSRRTASW
SGGLNNGYIPPQKTEVKPLGEVLGMQPSSYVPSEPSLAHLPRNGGSFGDDLHEVEL
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggctacggctcctccatttcaagtggaggatcagacggatgaggatttctttgacaaa
ttagttgatgacgatgacgatggcgagtttaagcctgctgcaccggccgaaaacgggagt
gattccgatgaggcgaaaacatttgcgaatttaagtattggtgaagaaaagggggaagcg
gtccgcggagatcttaacggcgcgtcgtcggatgggaatgttgaggagagtaggaggtcg
ctgcctctgtccgattcgtttgttttcgatagtggggttgaacctgatggtgtggttttg
ggaacgaatacagtgggttctcttgcttcgtccgattcgtttgtgtttgatagtgtgatt
gaatccaatgacatggatatagggacagaggaggtgatttcagattcggcgattagaaag
agtaatgaatctgctggttcgggtgttaaggaggtgcaatgggctgcgtttaatgcagat
tctggagagcatgctagtaatgggtttggatcgtgttcagattttttcagtgaattggga
gatggtgcagttgatcctcttgggaaggtagaggataattttggtactcaatcaaagatc
gtatctagcaatgaagaagttaaaactatgcacggtgacgacgaatacggtgatgctcaa
tatcaagagaatgtaaaagcttatgaggcaggaatcggacaaagtggagatgagctgggt
ataaatgggagtcaatatttggagaatcaaagttacggggcaggtattggacaagctgca
gatgggcaggatctaaatagtagtcaatctttggaggatctttatcctgggtggaagtat
gacccgaatactgggcaatggtaccaaattgatggttatgatgctgcgaataatatacaa
gggagcttcaactccaagagttccgaaaattgggccgtttctgacggaaattctcaggct
tcttacttgcagcatacagctcagtctgcaattggcactgtaaccgaaagtggtgcgaaa
gagaatatagctaactggaatcagttgtctcacgggaatgtcacaactgagagtgtcact
tattgggatcaggcttcacaagagactggtggtgctgagagtgtgtctagttggaatcag
gtttcacaagggaataatgggtacccagcacatatggtttttgaccctcaataccctgat
tggtattatgatacaattgcccaggagtggcaatcactggagacctacatctcatctgtt
caatcaacaagtcaagctcagggtctgcctaatcaaaatggttttgcatcaactggaaca
ttttctcatgaaaatgaccaaaagagttatgttgactacgggcaagtgaatgcatcatct
ggaacattttcccatgaaaatgaacaaaagagttatgttgactatgggcaagtgaataat
catcagcttcaagggtttggtgctcaaagccaggagtccaactggactggttcatcaagc
aattacaatcagccaggtttgaatatgtggcaacaacctgcgaatgttggcaagagcgag
gctcctgtgaattttagtggaaagcagcaatgggaggatgatcacagttcacattactca
atgagcaaccatgtcagtcaacagaatacctatgaatcgaggggtacagtcccatcttac
gataataaagcaactcagagtagtactcatggttttgttcctagttggaacttcagccag
cagcttaatcagccgagcatgcagcagtatgaacaaatgcacgtgtcgaaagattacagt
ggcaatcaaagcataattagtgactcacagcaacagtttcagactggccatcaactttct
ttcgatcctaatgggggaaggtcatctgcaggccgtcctccgcatgcattggttactttc
gggtttggtgggaaactcattgtgatgaaagatagttctctcagtgcttcatcctatggg
agccagggtcctctaggaggctcaatatctgtcctcaatgtgatggaggttgtcacagag
aaaactgattcatcaagtggaggaggtgctctagaatatttcaatatactgagcagacag
tccttccctggtcccttggttggagggaatgttggtagtaaagagctgaacaagtggatt
gatgagaggattgcggtttgcaagtctcctgaggtggactacaggaaaggggaaattttg
cagttgcttctgtcgttgctcaagatatcttatcagtattatggaaagcttcgatctccg
tttggctctgacacgtccaaggaaagtgatgttccagaagcagcagttgctagacttttt
acttccgccaagaggaatggtgagcaattctgtgactatggtgctcttgcccactgcttg
cagaaattgccatctgaaggacagatgcaggcaactgctgctgaggtccaaactcttctg
gtttctggtagaaaaaaagaggctttacattgtgcaactgagggtaagttatgggggcct
gcacttgttcttgctgcacaacttggtgaccagttttacgttgacaccgtgaagcaaatg
gcggtttgccagctagtgtctggctcacctttgcggaccttatgcctgctaattgctggt
caaccagcagatgtgttctctgcagacaccacatctgatagcagcatttatggtgctgta
aatatgtctctgcagccttcacagcttcagggtggcactactggtatgctagacaattgg
gaagagaatttggcagtaataactgctaatagaacaaaggatgatgaacttgtgcttatt
catcttggagattgcttgtggaaagatagaagtgaaattattgcagcacacatttgctac
ttagttgctgaagcgacttttgagccatattcagacagtgcaagattgtgtcttattgga
gcagatcacttgaagttccctcgaacatatgctagtccagatgctattcagaggacagag
ttatatgaatattcaaagctgcttggtaatgctcagtttgtcctgctaccatttcaaccg
tataagcttatatacgcacatatgctggctgaagtgggaaaagtatcggagtcattgaag
tactgtcaagcggtattgaaatctctaaaaactggtcgattgcccgaagtggacatgtgg
agaaaactcgtctcatcgcttgaggaaaggatacggactcaccaacagggtggatactcc
acaaactctgctccagcaaaattagtggggaaattgctcaacctttttgataatactgct
catcgtgttgttgggggcctacctccgcctgtaccatcgatgtcacagggtggtgcacaa
gctaatgaacattaccagaccatggggcctagagtatcaactagtcaatcaaccatggct
atgtcatcactaatgcctccagaatcaatggagcccatcagtgaatggaccgctggtggc
actagaatgacaatgcataacagaagtgtttcagagccagattttggtagaacccctaga
caggtacattcatcaacggaagcgtcatcatccagtgcacaaggcaaagcatctgcgtcc
cgctttggtcgtttcagttttggtgcgcagctcttgcaaaagaccgtggggttagtctta
aagcctcgtcaggaccgacaggcaaagttgggcgaacagaatagattttactacgatgaa
aagctcaagagatgggtagaggaaggggctgaagcccctgccgaagaagcagccctgccg
cctccaccaacaattccagaatttcataatggaatgtcagattccaactttagaagtgct
tcaaaagacgacgggccttctaataacggaaacctggaatataaaagcactagtcctttg
caacatagttcaggaattccacccattccatctgcttcaaaccaattttcagctcgtgga
cgaacgggtgtccgatcgaggtatgttgacaccttcaacaaaggtggtgggaacccaaca
aatttgttccaatcaccttcagttccatctgttagacctgctagtggcgccaatccaaaa
ttttttgttccgtcacctgtatcctcaagtgaacagacattagatactacagataatgtg
caagaaaccacagcaactaatgaaagttcctcaatacccactgcaaataactcattccac
tctcctcctacatcgatgactatgcaacggtttccaagcatggacaacatcttaaacaac
aggacagttacaaacggtagtgtctctctttcatctcattcacgacgaacagcttcatgg
agcggagggttaaacaatggttacattcctccacagaagactgaggtgaaacctcttggg
gaggtattaggtatgcaaccctcgtcatatgtacccagtgaaccttctttggcacacttg
ccgaggaatggtggcagttttggggatgatcttcatgaagtagaactttga
DBGET
integrated database retrieval system
