Rhododendron vialii: 131333679
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Entry
131333679 CDS
T09330
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131333679
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131333679
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131333679
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131333679
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131333679
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
RPN1_RPN2_N
Myticin-prepro
Motif
Other DBs
NCBI-GeneID:
131333679
NCBI-ProteinID:
XP_058224320
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All DBs
Position
7a:15090456..15166154
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AA seq
643 aa
AA seq
DB search
MNAYESYSRDHLPGFLDESLDDESVSASVHGFEPQEDVDSSLSNTVSAFSPLHWPSAGDG
EYKPLISVSPGFLSTEIMPAMVGAGLANLGNTCFLNAVLQCFTHTVPLIQGLWSSNHARP
CDRDSVGFCVLCALRDHVELSLASMGTVVSPRNLVDNLSYISSTFRRFQQEDAHEFLQCL
LDRLDSCCTYSESKDMAMTSEDENLVKQVFGGRLISKLRCCKCGHCSDTYEPLIDLSLEI
ENVDTLTSALESFTKMEKIEDPDMQFTCDECKERVSIEKQLILDQVPSVATFHLKRFKND
GVFVEKIDKYVEFPLELDLLPYTSGSQNTTGELKYDLYAVVVHTELSSTCGHYYCFVRCA
QEVWYKFDDSKVARVGEDFVLSQEAYILFYAKQGTPWFSSFLETEKSYLDQYKSNHPPKS
VLDSTDRIYTSSPNVTSNCYSEVKKAREEVVGVSVESFNGYINGVQGNEAKADPPSLFTP
APLVMSSSSNGTSDKVEKKFSPSVLKENKCNQEFNEIKNGANINLSMPLRSPSPDIYAEE
APVSSYSIPRDHLIPEKQVPCKRKLDEDLEDSRKKQAAFKLLKNMPNDRSSKLLAAMNGS
HDLIGKKIRIKELPSNRNNRASSTSHKPNLDSFLRPVAAGSLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgtatgaatcgtacagtcgcgaccacttgcccggtttcttggacgaatcccta
gatgacgagtctgtttcggcatcggttcatggttttgagccccaagaagacgttgattct
tcgctgtcgaatactgtttcggccttctcacctctgcattggccttcagcgggagatggt
gaatacaagccattgatttcagtttctccaggtttcttatccactgaaattatgccggct
atggtgggtgcagggcttgcaaatctgggcaacacttgctttcttaatgcagtcttacaa
tgtttcacacatacagttccacttattcagggtctttggtcatctaatcacgcaaggcct
tgcgatcgtgatagtgtaggcttttgtgtactttgtgctcttcgcgaccacgttgaactc
tcactagcttctatgggcacagttgtctccccaaggaaccttgtcgacaatttgagttat
atttcatctactttccggagattccagcaggaagatgctcatgagttcttgcaatgctta
ctggatagactcgacagctgttgtacttattcagagagtaaggatatggctatgacttca
gaggacgagaacttggttaagcaggtttttggaggtcgtcttattagcaaacttcgctgt
tgcaagtgtggtcactgttctgacacttatgagcccctgattgacttgagtttagagatt
gagaatgtggatacacttactagtgctctggaatctttcaccaagatggagaagattgaa
gatccagatatgcagtttacttgtgatgaatgcaaggaaagagtgtcaatagagaagcag
cttatattggaccaggttccatcggttgctacattccatttgaagagattcaagaatgat
ggtgtctttgttgagaagattgacaagtatgtggaattcccgctggagctagacttgctg
ccgtacactagtgggagtcagaacactactggggagttgaaatatgatctttatgcagtt
gtggtgcatactgaactctcatccacttgcgggcactactattgctttgttcgttgcgcc
caagaagtatggtacaagttcgacgactcaaaggttgctagggttggagaagattttgtg
ctttctcaggaagcctacattctattctacgcgaagcagggcacaccctggttttcaagt
tttttggaaacggaaaagtcctacttagaccaatataaatccaaccatccacccaagtca
gttttggatagcacagatcgcatctatacatcatcccccaatgtgacaagcaattgttac
tctgaagtcaagaaagcaagagaggaagtggttggcgtttctgtggagtcttttaacggg
tacataaatggtgttcaaggcaatgaggctaaagccgatcctcccagtttatttactcca
gcgcctctggtaatgagtagttcttccaatggaacatctgataaggttgagaaaaagttc
tctccatcagtgctcaaagaaaataagtgcaatcaggagttcaatgaaattaaaaacggt
gccaatattaatctatcaatgcccctcagatcccctagccctgatatatatgcagaagag
gctccagtctcgagttattctatcccgcgtgatcatctgataccagagaaacaagttcca
tgtaaaagaaaactggacgaggatctggaggattcacggaaaaagcaggcggcttttaag
ctgttgaaaaacatgcccaatgacaggagctcaaaattactggctgccatgaatgggtcc
catgacctgattggtaagaaaatcaggataaaagaattgccttcaaatagaaacaacagg
gcttcgagtactagccacaagcccaatcttgactcgttcttgcgtccggtggctgctgga
agtttacgctga
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