Rhododendron vialii: 131333749
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Entry
131333749 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131333749 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131333749
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
131333749
TFIIIC, fungi type
131333749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
TPR_19
TPR_14
TPR_16
TPR_12
TPR_9
TPR_11
TPR_6
TPR_7
TPR_17
TPR_20
NatA_aux_su
TPR_CcmH_CycH
TPR_15
ARM_TT21_4th
DUF7017
ANAPC3
ANAPC5
TPR_10
BDV_P24
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
131333749
NCBI-ProteinID:
XP_058224436
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All DBs
Position
7a:15753362..15794038
Genome browser
AA seq
982 aa
AA seq
DB search
MAGGGMGTSGTLNGERGESNSFSSLNSMDTCKRDSDDSRMELIDAVQDDQERKEGEGDED
VNDEFEDETDEEEDGDGDGVYAFRFDGEMDPLAFTEDDTFGVQPYQQFERLEHAYEALAE
RKRKSLSQPHPDPRFFGSESPLKKSRQEGFNGASMEEIMEVMNYGRRKRSKKSRKRGRRK
GSKNKLNPEVTRKLGDATLHYAHGRYEEAICALKEVIRVAPNLPDPYHTLGIIYSEIGDK
KKALNFYMLAAHLTPKDSSLWKLLVPWSIEQGNAGQARYCLSKAITADPADMSLRFSRAS
LYVELGEYQKAAESYEQISRLCPENLEALKTATMVVTSVLLAYSLYQKCGQKERSITILE
DYLKSHPSDADLVVVDLVASTCMNNGEHTKALQHIEHAHRVYCSGKELPLYLSIRAGICY
VHLGDDEKAESIFSVLQRENVYEHPHLAREVADSLMALGHYKYALKYYMMLEGIGEDGGL
HLRIAQCYLSVSDRGRAIEYLYTALRVMEDSVDARLALASLLLDEDKQDEAISVLSPCKS
TDSKLGLNSDKTKPWWLNGKIKLELSRIYKTKGMTEAFVDAIFPSVRESLFLETIQQKVR
AKKSLSKSVLSERVKVLDAHHTGDVFQGFKPVASTSDLSKASRAKKLLQKKAMLKEAKKA
AAMAAGLDWKSDNSDEDSPQQAMRDPPLPNLLKDEEHHHLIIDLCKSLAALKRYWEAIEV
INLTLKLASNTLSVEKGEELRSLGAQIAYNITDPSHGWDYARHVVNQNPYSFAAWNCYYK
VVSRLENRYSKHNKLLHGMRVKYKDSIPPIIISGHQLSMISQHQAAAREYLEAYKSMPDS
PLVNLCVGTALINLALGLRLQNKHRCLLQGLAFLYNNLRLCESSQEALYNIARAYHHLGL
VTLAASYYEKVLAIHEKDYPIPKLPNENPVDMDNQNKNYCDLGREAAYNLHLIYKTSGAL
DLARQGMRMLAMEEDGDEGNAY
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggaggaatgggaacaagcggcacgttgaatggtgaacgcggcgaaagcaat
tcattctccagtttgaattccatggacacctgcaaaagagatagtgatgatagcagaatg
gaattaattgatgctgtacaagacgaccaagaacggaaagagggtgagggagatgaggat
gttaatgatgaattcgaggatgaaactgacgaagaagaagatggagacggtgatggtgtg
tatgcattcagattcgacggggagatggatcctctggctttcactgaagacgataccttt
ggagtccaaccttatcaacaatttgagcgccttgagcacgcgtatgaagctttggctgag
aggaagcgtaaatctctttcccaaccccaccccgacccgcgtttctttggtagtgaaagc
ccacttaagaagtcaaggcaagagggtttcaatggagcgagcatggaagaaataatggaa
gtcatgaactatggtcgtcggaagagatcaaagaagtctaggaagagagggaggcggaag
ggatcaaagaataaactaaatccagaagtaacacgaaagcttggtgatgctacacttcac
tatgcacatggccgatatgaagaggctatatgtgctctaaaagaagtgattcgggttgca
ccaaacttgcctgatccatatcatacccttggcattatctacagtgagattggggacaag
aagaaagctttgaatttctacatgcttgctgcacatttgacaccaaaggattcgtcactt
tggaaactcctcgtgccttggtccatagagcaaggaaatgctggtcaggcaaggtactgc
ctctcaaaagctataacagcagatcctgcagatatgagtcttaggtttagtcgtgcttct
ctgtatgttgagcttggagagtatcagaaagctgctgaatcatatgagcagatttcgcga
ctctgtccagagaatcttgaagcactcaagacagccacaatggtcgtcacatctgtttta
cttgcctactcattataccaaaaatgcggtcagaaggagcgttctattaccattctggag
gactatcttaaaagtcatccaagtgacgctgatttagttgtagttgatctggtagcttca
acatgcatgaataatggtgaacataccaaagctcttcagcatattgagcatgcacatcgt
gtttattgttctgggaaagaattgcctctttacttgagtatcagagcaggcatatgctat
gttcatctcggagatgatgaaaaggcagagagtatcttcagtgttttgcaacgggagaat
gtgtatgaacatcctcatctagctcgtgaagttgcggactcattaatggctcttgggcac
tacaaatatgcgctgaagtactatatgatgttagaaggaattggtgaagatggtggtcta
catttgagaatcgctcaatgctacttatcagtgagtgatagaggaagagcaatagaatac
ttatacacagctttacgtgtaatggaggatagtgttgatgctcggttagctctggcctca
cttcttcttgatgaagataaacaagatgaagccatttcagttctttctccctgcaaaagt
acagattcaaaattaggattaaattctgataaaaccaagccatggtggcttaatgggaaa
ataaaactagagcttagtcgcatttacaagaccaaaggaatgacagaggcctttgttgat
gctatctttccctctgttcgagaatctttgtttcttgaaactattcaacaaaaggttaga
gcaaaaaaaagcctctccaaaagtgttctttctgaaagagtcaaggtattggatgctcat
cacaccggtgatgtatttcaaggattcaaacctgtagcttcaacttcagatttatcaaaa
gcttcccgagccaagaagttgcttcaaaagaaggctatgctgaaagaagcaaaaaaagct
gcagcaatggctgctgggcttgattggaaaagtgacaattccgatgaagattctccgcag
caagcaatgagagatcctcccttgcctaatcttctgaaagatgaggagcatcaccatctg
attatcgatttatgtaagtcgttggcggccttgaaaagatattgggaagcaatagaggtt
atcaatcttacactgaaactcgcttcgaacacactgtctgttgagaagggggaggagctt
cggtctcttggagctcaaatagcttataatattactgatccttcacatggatgggactat
gcgcggcacgtagttaatcaaaatccctacagctttgctgcttggaattgctactacaaa
gtagtttcaagattggagaatcggtattcgaaacataacaagctccttcatggtatgcgt
gtcaaatacaaagatagcattccgcccattatcatatctggacatcagcttagcatgatc
agccagcatcaagctgctgcaagagaatacctagaagcatataaatcgatgccagacagt
cccctggtcaatttgtgtgttggaactgccttgatcaacttagcacttgggctcagactt
cagaacaagcatcggtgcctgctgcaaggtttagctttcctctacaacaatttgcgactt
tgtgaaagcagccaggaagcactgtataacatagctcgggcatatcatcatctcggtctt
gttacactcgctgcttcttattatgaaaaggtgcttgcaatccatgagaaggattatcca
atcccaaagcttcccaatgagaatcctgttgatatggataatcagaacaagaattactgt
gaccttggaagagaagcagcttacaatctccacttgatctacaaaacgagtggagcactt
gatcttgctaggcagggtatgagaatgttggcgatggaagaggatggtgatgagggcaac
gcatattaa
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