Rhododendron vialii: 131334371
Help
Entry
131334371 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131334371
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
rvl
Rhododendron vialii
Pathway
rvl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131334371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131334371
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131334371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
TPR_VPS8_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
zf_RING_Vps8
Phage_int_SAM_4
Motif
Other DBs
NCBI-GeneID:
131334371
NCBI-ProteinID:
XP_058225332
LinkDB
All DBs
Position
7a:complement(128529..148435)
Genome browser
AA seq
1984 aa
AA seq
DB search
MTRQLIRPSLEGEMELDLDAFLASQSTSDDDDDRLRSISHHRTVDEILNDSDSSSSPPSL
NQSFLYRPRSSSDQEDVNDASSSVISPKTLPDSRVKFSSSSTRVESGEFSANSLSLGRGL
ALRPLPLLFGSGVRSTVKKPGAALAAAVAASRPTPTPHAAALKSRRAGSSSSSSSATLLI
SSVLGSQELDSKAQVVSNDGLDSFAPEISHPDGKLVQENDVPWDNYQSAAAEAADSKVDV
TPEISGKGDTIGETSSELRVGRVFALEPSVVIDSQEVSPGPHIDDPYILSRVNHEEQLHL
EDSTTMSVTNGFKYDQVPSSSWDENNGAISEFAEATETADKRIDSSHDGIDFEDELPIVM
VETSEIDKAKPFSRRGASLTGEDTSYRNDVMDLDEDIISQWESKRGNKRTQKKSHASLKP
LELAEEIEKKHAFIGLDMENDIAAQPMRLEGVRRGSTALGYFDVYANNTITRTISSQAFR
RDQGSPQVVTVHLNYIAVGMSKGVVIVVPSKYSPHCADNMDAKMLMLGLQGDNSHSPVTS
LCFNQLGDLLFAGYCDGRVTVWDVQKGSALKVVTGIHDAPVVHMLYLGHDSQVTRQFRLV
SGDSKGLVWLITFSVVPWLNRFSFSTTCLLDGRTTGKVLCASPLLSDECCGGALMSSQAN
TANTTGSSSTIGSMMGGVLGADSSRKLLNEKSSSVEEGVVVFATYQSALVARVSPSVVVY
AQLPKPDGVREGSMPYTAWKCMGQQHGSSTDNIPVEASEKVSLLAIAWDRKVQVAKLVKS
ELKIYGKWTLESSAIGVAWLDDQMLVVLTSNGQLFLYAKDGTVIHQTSFAVDGSGGDDLV
AYHTQFTNLFGNPEKAYHKCIAVRGASIYVLGPMHLIVCRLLPWKERIQVLRKAGDWMGA
LNMAMTLYDGQAHGVIDLPRTLDAVQEAIMPYLVELLLSYVDEVFSYISVAFCNQIGKLE
QLDDSESKACSVHSEINEQFTRVGGVAVEFCVHINRTDVLFDEILSKFAAVQHRDTFLEL
LEPYILKDMLGSLPPEIMQALVEHYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHRL
YGALVYLFNRGLDDFRAPLEELLIVFQNSERETAAALGYRMLVYLKYCFSGLAFPPGHGT
LPSLRLPSLRTELLQFLLDASNAPNSCVVTSFLSTAAYPYLYHFLELDTEATLEVLRCAF
VDDDIPKRGYPLCDSANESLEAEKENDSVGVGQNVMVQKTVDALIHVLGKGTYQADKSVS
SGDGDLAEVWPSEKDIGHIFEFIAYYISAKKAVVSNTILSRILEYYTSDINLPPSVPMHA
TDTCRKREKQMLALLEVVPDTGWDASYVLHLCERSQFYQVCGLIHAIRHQYIAALDSYLK
DVNEPVHAFSYINDMLEQLSDNEADSFRSAVIFRMPDLITLSREAAFFLVIHHFSRECQH
ILSELRSHPKSLFLYLKTIFEVHLAGTLNFSCLTKDETMGFRIGRKVRDQSVEAYLERIS
DFPKFLRSNPVLVTDEMIELYLELLCQYERSSVLKFLETFESYRVEHCLRLCQEYGIIDA
AAFLWERVGDVGSALLLTLSGLDEKFVALDTAVENVLPDAGMEHFSTVSNKEVHDIREIL
HACIGLCQRNTPRLDPEESESLWFQLLDSFCEPLLESLKDEKVCQQETRIETLESSGGQE
DKETCIIKWKISKSHEGAHILRKLFSLFVKEIVEGMIGYIRVPAIMSKLLSDNGSQEFGN
FKVTILGMLGTYGFERRILDTAKSLIEDDTFYTMSLLKRGASHGYSPRSLLCCLCNCLLT
KNSSSSSIRIFNCGHATHLQCELQENEMSHGGSAGCPVCMPKKKGQRSRNKTLLTDNGLV
SKSRSRPQQSHGTTSLYPHESDSFENPYGYQQISRFDILTNLQKDQRLIKIENMPQLRLA
PPAVYHEKVKKGVNLLTGESSSALARVEKPSKSRQLREIKVKGSSIRLPLKSNIFGNKEK
SNKR
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgactcggcagctcatcagaccatcacttgaaggggaaatggagctcgatctcgatgcc
tttctggcttcacagagtactagcgacgacgacgacgaccggcttcgttccatctctcat
catcgaacagtcgatgaaatcctcaacgactccgattcctcctcctcacctccttccttg
aatcagtccttcctttatcgccctcgttcctcttctgatcaagaagatgtcaacgacgcc
tcctcctccgtaattagccctaaaaccctcccagactccagagttaagtttagttcgtct
tctacccgggtggaatcgggtgaattctcggccaattctttatctctaggtcgggggctt
gctttgcgccccttgccgctcttgtttggaagcggcgttcgctcaactgtgaagaagccg
ggtgctgcactcgctgctgctgtggcggcttcgcgtcccactcccactccgcacgctgct
gcgcttaaatccagaagagctggcagcagcagcagcagcagcagcgctactttacttatt
agtagcgttcttggcagtcaagaattggattctaaagctcaagttgtttccaatgatggc
ttggatagcttcgctcctgaaatcagtcacccagatgggaaattagtccaagaaaatgat
gttccatgggataattatcaatctgcagctgcggaagctgctgattctaaggtggatgtt
acacctgaaatatcggggaaaggtgatacaattggggagacttcgagtgagctgagggtt
ggcagagtttttgcccttgaaccaagcgttgtaattgattcacaggaagtttcaccaggc
ccccatatagatgatccatacatcctatctcgtgttaaccatgaagagcagttgcatttg
gaagatagcaccacaatgtctgttaccaatggctttaaatatgaccaagttccatcttca
tcatgggatgagaataatggtgctatttctgagtttgctgaggctactgaaactgccgac
aagaggatcgattcttctcacgacggaatagattttgaggatgaattgccaattgtaatg
gtcgaaacatctgaaattgacaaggcgaagcctttttctagacgtggagcgagtcttacc
ggagaagacaccagttataggaatgatgttatggacctggatgaggacataattagtcaa
tgggagagcaagaggggtaataaaaggacacaaaagaaatcacatgcgtccttgaagccc
cttgaattagctgaagaaattgaaaagaaacatgccttcattggtttggatatggaaaat
gatattgctgctcaaccaatgaggcttgagggtgtacggagggggtctactgccctggga
tacttcgatgtttatgcaaacaacactatcactcggaccatctcatctcaggcattcagg
cgggatcagggatcccctcaagtcgtgacagttcatctcaactacattgctgtgggaatg
tctaaaggggtggttattgttgtgcccagtaaatactctcctcattgtgctgacaacatg
gatgcaaagatgctgatgcttggattacaaggggataattctcattctccagtaacatct
ttgtgcttcaatcagctgggagacttactctttgcaggttattgtgatgggcgtgtaact
gtttgggatgtgcagaagggatccgccttaaaagttgttactggtatacatgatgcacct
gttgtacatatgttatatctgggacatgattctcaagttactcggcagtttaggctagtt
agtggtgatagtaagggtttggtttggttgattactttctcagtggttccatggctcaat
agattttccttcagtacaacgtgtcttcttgatggacgaacaacgggcaaagtattatgt
gcttctccactgctttctgatgaatgttgtggaggtgctttgatgtcctcccaggccaac
acagccaacactacaggttcaagcagtactattggtagcatgatgggtggtgtgcttggg
gcagattctagtcggaaactcttgaacgaaaagtcttcctcagttgaagaaggggtggtc
gtatttgccacttaccaaagtgctctggtggcaagggtgagtcctagcgtggtggtctat
gctcaacttccaaagcctgatggtgttcgtgagggttccatgccttacactgcctggaaa
tgtatggggcagcaacatggttcttccactgacaatattcctgtggaagcatcagaaaaa
gtttcacttcttgcaattgcttgggatcggaaagttcaggttgcaaaattggtcaaatca
gaattgaaaatatatgggaagtggacccttgaaagctcagcgataggggtagcatggttg
gatgaccagatgttggtggttctcacatcaaatggtcaactttttttgtatgcaaaagat
ggaactgtgattcaccagacaagttttgctgttgatggctctggaggagatgatcttgtt
gcttatcatacccagttcacaaatctctttggaaaccctgagaaagcttatcacaagtgt
atagctgtaagaggagcttctatatatgtactcgggcctatgcatctaattgtttgccgc
cttctcccatggaaggagcggattcaagttttgcggaaagcaggtgactggatgggtgca
ttgaacatggcaatgacgctttatgatggtcaagcccatggtgttattgaccttcctaga
accctggatgccgtacaggaggcaattatgccctacctagtggagttgctcttgtcgtat
gttgatgaagtattttcctatatatcagtggccttctgcaaccaaattggaaagcttgaa
caattggacgactcagagagcaaagcatgttctgtccattcagagatcaatgagcagttt
actcgtgttggtggtgttgcagttgaattctgtgttcatatcaatagaactgacgtcctc
ttcgatgaaattctttccaaatttgcggctgttcaacatagagatacatttttagagctt
ttggagccatatatattgaaagacatgcttggatccctacctcctgagattatgcaagca
ctggtggagcattatagcacaaaaggttggttgcagcgggttgaacaatgcgttctccat
atggatatttcttccttggacttcaatcaggttgtccgtttatgtcgggagcacagatta
tatggtgcacttgtatacctgtttaataggggtttagatgatttcagggcaccattagaa
gagctgctgattgtttttcaaaatagcgaaagagaaactgctgccgcccttgggtaccgg
atgcttgtttacctgaagtactgcttttctggtcttgcttttccaccaggacatggaact
cttccctctctacgcttgccgtctcttaggacagaacttctgcagtttctattagatgct
tcaaatgctccaaattcatgcgtagttacaagcttcttgtctacagcagcatacccgtac
ctttatcatttcttagagttggatactgaagctaccttagaagttttgagatgtgcattt
gttgacgatgacattccaaaacgtggctatcccttgtgtgattcagccaatgaaagtttg
gaggctgaaaaagaaaatgactcagtgggtgtgggacaaaatgttatggtccaaaaaacg
gtagatgctcttattcatgttcttggcaagggcacctaccaagcagacaagtctgtcagc
agtggtgatggtgacttggcagaagtttggccttcagagaaagacataggtcatattttt
gagtttattgcatactacatttccgctaaaaaggctgtcgtttcaaataccatattgagt
cggattctcgagtactatacatctgacattaatcttccaccaagtgtcccgatgcacgct
actgatacttgcagaaaaagagagaagcagatgcttgccctattggaagtagtgcctgac
acaggctgggacgcatcatatgtattacacctgtgtgaaagatctcaattttaccaggtt
tgtggcttaattcatgccatcagacatcaatatattgctgctctggatagctacctgaaa
gacgtgaatgaacctgttcatgccttttcatatatcaatgatatgttagagcaactgagt
gacaatgaggctgattcttttcggtcagcagtcatttttcgaatgccagatctgattacc
ttaagcagagaggctgcattctttctggttatacaccatttcagtagagaatgtcaacat
atattatctgaactgcgttctcaccccaaaagccttttcctttatctaaagacaatcttt
gaggttcacttagctggaaccctcaatttttcttgtttaacaaaagatgagacaatggga
tttcgaattggaagaaaagtaagggatcagtctgtggaggcttacttggaaagaatctct
gatttcccgaaattcctgcgtagcaatccagttctagtaactgatgaaatgattgagctt
tatcttgagctattatgtcaatacgaacgcagttcagttctcaagttcttggagactttt
gaaagctatagggtggagcattgtttacggctgtgccaggaatatgggatcatagatgct
gctgcattcttgtgggaaagggttggtgatgttgggagcgctctcctccttactctttct
ggacttgatgaaaaatttgttgcacttgatactgctgtggaaaatgtacttcctgatgct
ggtatggagcacttcagcactgtatcaaataaggaggtgcatgatattcgtgaaatactg
catgcttgtattggcctgtgccagcgtaacactcctagattggatcctgaggagtcagaa
tccctctggtttcagttacttgattcgttttgtgagcctttgttggaatcgttgaaggat
gaaaaggtttgtcaacaagaaacacgcattgaaacactcgagtcatcgggtggtcaagag
gataaagagacatgcattattaagtggaagatctcaaaatcccacgaaggtgctcatatt
ctgaggaaattgttttctctgtttgtcaaagagattgttgagggaatgattggatacatt
cgcgttcctgctatcatgtctaagctcctctctgataacggtagccaggaatttggtaat
tttaaagttaccatattgggaatgcttgggacatatggttttgagagaagaatactggac
actgctaaatcattgattgaggatgatacgttttataccatgagcttactcaaaaggggg
gcttctcatggttactctccccgtagtcttctatgttgtctgtgcaattgccttctcacc
aagaactcttccagctctagcattcggattttcaattgtggtcatgcaacccatctccag
tgtgaacttcaggaaaatgagatgtcacatgggggctcagctggatgccctgtttgtatg
cctaagaagaaaggtcagaggtctagaaataagacactgcttacagataatgggttagtg
agcaagtcccgatcaagacctcagcaatctcatggaactacttctctgtacccacatgaa
agtgattcatttgagaatccatatggatatcaacaaatttcaaggttcgacatcttgact
aatcttcagaaagaccagagattgatcaagatagaaaacatgcctcagttgaggcttgcc
ccaccagctgtttatcatgaaaaggtgaagaaaggggtcaatcttcttacaggtgaaagt
agcagtgctcttgcaagagtagaaaaaccgagtaaaagcaggcaacttagagaaataaaa
gtgaagggatcatcaatcaggttgccgttgaaatcaaatatctttggcaacaaggagaag
tcgaataagcggtga
DBGET
integrated database retrieval system
