Rhododendron vialii: 131334557
Help
Entry
131334557 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131334557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131334557
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131334557
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131334557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
131334557
NCBI-ProteinID:
XP_058225618
LinkDB
All DBs
Position
7a:523567..526644
Genome browser
AA seq
308 aa
AA seq
DB search
MELNNIECISDVTDEDEIHRLLLHPQFASSKPQIHPTTSVHELLECPVCTNSMYPPIHQC
HNGHTLCSTCKERVHNRCPTCRQELGDIRCLALEKVAESLELPCKYSTLGCPEIFPYYSK
LKHEAICNFRPYNCPYAGSECSVVGDIPYLVTHLRDDHKVDMHSGCTFNHRYVKSNPREV
ENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYSYSLEVGGNGRK
LIFEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQTPDGG
VCIPNLCS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaataacattgagtgtatatcggatgttacggatgaggatgagatccatcgt
cttcttcttcaccctcagtttgcctcttccaagcctcagattcatcccacaacaagtgtc
catgagcttctcgaatgcccagtttgtaccaattcaatgtaccctccaatacaccagtgt
cataacgggcacacactctgctccacctgcaaagagagggtacacaatcgctgtcccact
tgtagacaggagctcggtgatataaggtgcttagcgttagaaaaggtggctgaatcactt
gaactaccttgcaagtatagcactcttggttgccctgagattttcccctactacagcaag
ctcaaacatgaggccatttgtaattttagaccatacaactgcccctatgctggatcagag
tgctcagtcgtgggagatattccgtacctagttactcatcttcgggatgatcacaaagta
gacatgcactctggatgcacttttaaccatcgctatgtcaagtctaatccacgtgaagta
gagaatgccacatggatgttaaccgtttttaattgttttggtcagtacttctgtctccat
ttcgaagcctttcaactgggtatggctcctgtttacatggcgtttctacgattcatgggt
gatgagacagatgcccgaaactacagttacagtttggaggtagggggaaatggccggaaa
ctcatttttgagggcacccctaggagcataagggatagtcacagaaaggtgagagacagc
cacgacggcctcattatacagcgaaatatggcacttttcttttcgggaggagaaaggaaa
gaactgaagctccgagttacagggcgaatatggaaggagcaacagactccggatggtggg
gtgtgcatacccaacctctgtagttag
DBGET
integrated database retrieval system
