Rhododendron vialii: 131334563
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Entry
131334563 CDS
T09330
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131334563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131334563
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131334563
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Motif
Pfam:
Ion_trans
cNMP_binding
APOC4
Motif
Other DBs
NCBI-GeneID:
131334563
NCBI-ProteinID:
XP_058225632
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Position
7a:complement(635887..641789)
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AA seq
722 aa
AA seq
DB search
MDFQRDKFVRFEDWKSDQSSSSELQYSTEDGIWTRSRSMIGSVVGRTRSGFERVSKGIKS
FKTFSGTYRRDDQPTKELGSRVKILDPQGKFLQRWNKIFVLTCVIAVAVDPLFFYIPVID
DEKKCLSLDNKLDIIACVLRTFVDIFYILHIIFQFRTGFIAPSSRVFGRGELIDDPHAIA
KKYLSSHFVIDVLSILPLPQVVILVIIPQTKGPVALVTKEFLKAVIFCQYVPRLLRICPL
YKEVTRTAGIFAETAWAAAAFNLLIYMLASHVVGAFWYLFAIERQDRCWHDACTKDDCDS
LLYCREGAEPVDESLISSCAFLEPSEIKNRTTDFDFGIFLDALKSRIVEKGDFPKKFFYC
FWWGLRSLSSLGQNLKTSTFVGEIVFAVAISILGLVLFSLLIGNMQKYLQSITKRVEEMR
VKRRDAEQWMSHRMLPENLRERIRRYEQYKWQETRGVEEESLISNLPKDIRRDLKRHLCW
SLLKRVPMFEKMDEQLLDAMCDRLKPVLYTQTSFIVREGDPVDEMLFVMRGSILTVTTNG
GRTGFFNSVVLTAGDFCGEELYTWALDPKSSSPKFSSSLPTSTRTAEAITDVEAFALVAD
DLKFVASQFRRLHSKQLQHTFRFYSQQWRTWGACFIQAAWRRHCRRKAEKLLREEEDRLQ
DALAKEVGTSPSLGATIYASKFAANALRALRRSRAPSPKLPRRVPALLLQKPSEPDFTAE
EH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaacgagacaaatttgtgaggtttgaggattggaaatcagaccaatcttca
agttctgagctgcaatattctactgaggatggaatttggacaaggagtagatcaatgata
ggctcagtagtgggacgtacgcgaagtggatttgagagggtctccaaaggaattaaaagc
tttaaaacattttcaggcacctatcgacgagatgatcagccaacaaaagaattgggtagt
agggtaaagattctcgacccacaggggaagtttcttcagagatggaataaaatatttgta
ctcacttgtgtgattgctgtggccgtggatccattattcttttacatcccagtgattgat
gatgaaaagaaatgcctcagtttggacaacaaattggacatcattgcttgcgttcttcgc
acattcgttgatatcttctacatacttcacattatctttcaattccggacagggtttatt
gccccttcttcacgagtatttgggaggggcgagctaattgatgatcctcatgctatagcg
aaaaaatacctgtcctcccacttcgttatcgacgttttatcaatcctacccctgccacag
gtggtgatcttagtcattatcccccaaaccaagggcccggttgcactggttacaaaggaa
ttcttgaaggctgttattttctgccaatatgtgcctaggcttcttcgaatctgccctcta
tacaaagaagtgactagaacagctggcatatttgctgaaacagcttgggctgcagctgcc
tttaatctcttaatatacatgctagccagtcatgtagttggagccttctggtacttgttc
gcaatagaacgacaagataggtgctggcatgatgcatgtacaaaagacgattgcgacagt
ttattatactgcagagaaggagctgaaccagtcgatgaatctctgataagctcttgcgct
tttcttgagcccagtgaaataaaaaaccgaacaacagatttcgacttcggaatatttctc
gatgctcttaagtctcgtatagtggagaaaggagactttccaaagaagtttttttactgc
ttttggtggggactgcgaagtctaagttctcttggccagaacctcaagacgagcactttt
gttggggagattgtctttgctgttgccatttcaatcctaggattggttctgttttcattg
ctcattggcaatatgcagaaatatctgcaatctataacaaaaagagtagaagagatgaga
gtcaaaaggcgggatgcggagcagtggatgtcccaccgtatgctccctgagaacctaagg
gagcggattaggcgctatgaacagtacaaatggcaagaaaccagaggtgtcgaggaagag
tctttgattagtaaccttcctaaagacatcaggagggacctaaagcgccatctttgctgg
tctttgctcaaaagggtgccaatgttcgagaaaatggacgaacaattattggatgcaatg
tgcgatcgtcttaagccagttctttacacacagactagcttcatagttcgtgaaggggat
ccagttgatgagatgctctttgtcatgagaggcagtattttgacggtgaccaccaatggt
ggaagaactggctttttcaactctgtcgttctcacggcgggtgacttttgtggagaagag
ctttatacatgggctttggaccccaaatcttcctcccccaaattttcctcaagtcttccc
acctcaacccgaactgctgaagccataacagatgttgaagcttttgcccttgtggctgat
gacctgaagtttgtagcttcacagttccggcgtcttcacagcaagcagctccagcacact
ttcaggttctactcacaacagtggaggacatggggagcctgttttatacaagcagcatgg
cggcggcattgtaggaggaaggctgagaagttgttgcgtgaggaagaagataggttgcag
gatgctctggcaaaggaggttggaacttcaccaagtcttggtgctaccatttatgcatcc
aagtttgccgccaatgcactacgggccctacgtcgcagtcgtgcacccagtcccaaattg
ccacgtagggtcccggctttactgctccaaaaaccatcagagcccgattttactgccgag
gaacattga
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