Rhododendron vialii: 131334564
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Entry
131334564 CDS
T09330
Name
(RefSeq) long chain acyl-CoA synthetase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00061
Fatty acid biosynthesis
rvl00071
Fatty acid degradation
rvl01100
Metabolic pathways
rvl01212
Fatty acid metabolism
rvl04146
Peroxisome
Module
rvl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131334564
00071 Fatty acid degradation
131334564
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131334564
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvl01004
]
131334564
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131334564
Enzymes [BR:
rvl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131334564
Lipid biosynthesis proteins [BR:
rvl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131334564
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of breast milk
131334564
Exosomal proteins of breast cancer cells
131334564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131334564
NCBI-ProteinID:
XP_058225634
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Position
7a:623377..635597
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AA seq
682 aa
AA seq
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MIQKDQPNRFSGGGGDPPTPSSTYFYQPASIRLPLFFRKNNHGFPPEIEGLCLVFRERKE
KENANLRSSDSGVSVEKYPRNNMLGEREIVNGKAGGYVWLTYEDVYDIVSKVGASIRSCG
VKQGARCGIYGANCVKWVVSMQACNAHGLYCVPLYDTLGAGAVEYIICHAEISITFVEET
KIPEVLKTFPNTMKYLKTLVSFGKVTAEQKKAAENFGLALYSWDQFLQLGKNEHFDLPTK
KKTDICTIMYTSGTTGDPKGVMISHESILSIISAQNQSLESMNDQFSEKDVFFSYLPLAH
IFDRVIEEVFISTGASIGFWRGDIKLLIEDLRELKPTVFCAVPRVLDRIYSGLVEKTSSA
GFVKNALFNLAYSYKLRNMNKGYKHAEAAPIFDKIVFSKVKEGLGGNVRVILSGAAPLAT
YVETFLRVVSCAHVLQGYGLTETCAGSFVSKPDELAMIGTVGPPLPNVDVCLESVPEMGY
DALSSTPCGEICIRGNVLFSGYYKREDLTREVLVDGWFHTGDIGEWQPDGSMKIIDRKKN
IFKLSQGEYVSVENLENIYSRVSGIDSIWIYGNSYESFLVAVVNPNEKFLVHWAEENGLT
ANFSTLCENPKAKAFILEELTKTGKEKKLKGFELIKDVHLDPIPFDMDRDLLTPTFKKKR
DKFLKYYQNVIDSLYKRVKEAI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaaggaccagcccaaccgattctccggcggcggcggggaccctcctactcct
tcatctacctacttctaccaaccggcctccattcgcctaccattgttcttccgcaaaaat
aatcatggttttccgccggaaattgaaggactatgtttggttttccgtgaaaggaaggag
aaagagaacgcaaatttacgttcgtcggattcgggtgtttctgttgagaaatatccaaga
aacaacatgctcggagagcgcgagattgttaacgggaaggctggtggatatgtgtggtta
acttatgaggatgtatatgatatagtgtcgaaggttggagcttccatccgcagttgtggt
gttaagcaaggtgcgagatgtggaatctatggtgccaactgcgtgaaatgggttgtaagt
atgcaggcctgcaatgcccacggactttactgtgttcccttatacgacactttaggtgct
ggtgcggtggaatatatcatttgtcatgcagagatttcaataaccttcgtggaagaaact
aaaattcctgaggtcctgaaaacctttcctaataccatgaagtatttgaaaactcttgtg
agctttggcaaggttactgcagaacaaaagaaggcagctgagaattttggtctggcatta
tattcttgggatcagtttttacaactgggaaagaatgaacactttgatctcccaactaag
aagaaaacagatatttgtacaattatgtatacgagtggcacaactggtgacccaaaggga
gtgatgatatcccatgagagcattctttcgatcatatcggcacaaaatcagtcactcgag
agcatgaatgaccagtttagtgagaaggacgtgtttttttcatatcttcctctagcacat
atatttgatcgagtcatagaggaagtgttcatttccactggagcctcaataggattttgg
cgtggggatattaaactactgattgaagacctcagagaactaaaaccaactgttttttgt
gctgttccgcgtgtcttagacaggatatattcaggtttggttgagaagacttcttcagcg
ggttttgtcaaaaatgcattgtttaaccttgcatactcatataaactgcgtaacatgaat
aaaggctacaaacatgcggaggcagctccaatttttgataaaattgttttcagtaaggta
aaagaaggtctaggaggaaatgtacgtgtcattctatctggagcggcaccacttgctacc
tatgtagaaacctttctacgagtggtttcatgtgctcacgttttacaaggatatggttta
acagaaacttgtgcggggtcctttgtttcaaagccagatgaactggcaatgattggtaca
gtcggtcctccattgccaaatgtggatgtgtgcctagaatctgttcctgaaatgggatat
gatgccctatcaagcaccccttgcggtgaaatatgtatacgaggaaatgttctgttctca
ggatactacaaacgcgaggacctcactagagaggtgttggttgatggatggttccacaca
ggtgatattggtgaatggcaaccagatggaagcatgaaaattatcgaccgcaagaaaaac
attttcaagctttcacaaggcgaatatgtatcagttgagaatctggaaaatatctattct
cgtgtttctggtattgactcgatatggatatatgggaacagttacgagtccttccttgta
gctgttgtgaaccccaatgagaaatttttggtacattgggctgaagagaatggattgact
gccaattttagtaccctttgtgagaatcccaaggcaaaagcattcattcttgaagaactt
actaagactggaaaagaaaagaagctaaaaggttttgagttgataaaagatgtccacctt
gacccaataccatttgacatggaccgagatcttctcaccccaactttcaagaagaagagg
gacaagtttctcaaatactatcagaatgtcatcgacagtttatacaaacgtgtaaaggaa
gcaatctga
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