Rhododendron vialii: 131334724
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Entry
131334724 CDS
T09330
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
rvl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131334724
03460 Fanconi anemia pathway
131334724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131334724
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131334724
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
DUF6429
HHH_8
EarA
Motif
Other DBs
NCBI-GeneID:
131334724
NCBI-ProteinID:
XP_058225905
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Position
7a:7622886..7636981
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AA seq
818 aa
AA seq
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MDKHWRVVCGENQQLVEFMWKKRQEMAERPRGISENIERTLQKACANVCSSKTPIKTLKD
FSQIKGVGKWILRLMQEFFGTESGSSEQEESTNKGKKSKGTKRYVPQKNSVPYALLITLY
RGTATGSDFMRKPELIDAAEASGLSRVPIRPELGKGKPGQFGSSPREWYSGWSSMKTLVT
KGLVAKSSNPAKYMLTEEGREAAQECLSRSGLVDATESLIATERLPIVDLSTISDLECVR
PDVTGGVTMGSVSSSSQNKSVVTKGVMFGSVGSSLQKKSLDVPIVDLSTISDLECVRADV
TGGVMMGSVSSSSQNKSVVTKGSVGSSLQKKSLDVPPESLDRFLRMGYTKEQTLSAFAEV
SETSQNKEIASLWPEVLCHLREEQVYNLPLESQKSQNEDFLALSYTSKSRDGHLDLVMTE
NTRMELGCSGALRITKSSCLTADSSFTLEACSSNAQMELNCRGALRIAKSSCLSADSSLE
PCSSTGYPVYKRGLDGSEPNMNFYEGGLDGSEPNMNAYKGGLDGSEPNMNAYKGDLDGAE
PNMNIFTMPPLRFGERFEEAYEVILVLDDREHFASHGSRAGKIIENIRSQFKIRIEVRRL
PVGDGIWIARDKQLRVEYVLDFIVERKNVVDLHCSIRDNRYRDQKLRLMRCGLKKLIYMV
EGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLGDTLRRYGYLTQAITQHCKLLSAKGQ
RNSLGVCPTFGDFIRRSQNLDKMTVSDVFAIQLMQVPQVTEELAIAVLDLYPTLISLARA
YSLLEGDLCAQEEMLKKQSNNIISGAASKNIFKLVWGS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggataagcactggcgagtggtgtgtggggagaaccaacagctggtggagttcatgtgg
aagaagaggcaggagatggcggagagacccagaggcatttcggagaacatcgagaggact
cttcagaaagcgtgtgccaacgtgtgcagttcaaagactcccatcaaaaccctaaaagat
ttctcccaaatcaagggtgtgggaaaatggatattgaggctcatgcaggagttttttggg
actgaatctggttcttctgaacaggaggaatcaactaacaaagggaagaaatctaaagga
actaaacgctatgttccgcaaaagaattccgtgccctatgcgctgttgatcactctttac
agggggactgcaactggtagtgattttatgcgtaaaccggagctgattgatgctgctgaa
gcaagtgggctttctcgggtgccaattaggccagaactaggaaaaggaaaacctggacaa
tttggaagctcaccaagggagtggtatagtggatggagcagcatgaagacgttagtcaca
aaaggattggttgcaaagtctagtaaccctgcaaaatacatgctgactgaagaaggtcga
gaagcagcacaagaatgtctctcgagatctggtctggttgatgcaactgagagtttgatt
gcaaccgaaagacttcccattgtggacctaagcaccatttcagatttagaatgtgtccgt
cctgatgtcactggaggagtgacgatgggatcagtaagttcaagttcgcagaacaaatca
gttgtcactaaaggagtgatgtttggatctgttggttcaagtttgcagaagaaatcactt
gatgttcccattgtggacctaagcaccatttcagatttagaatgtgttcgtgctgatgtc
actggaggagtgatgatgggatcagtaagttcaagttcgcagaacaaatcagtagtcact
aaaggatctgttggttcaagtttgcagaagaaatcacttgatgttccccctgaatctctt
gataggtttttgcgcatggggtacacaaaggaacaaactcttagtgctttcgctgaagtg
tcagaaacatcgcagaacaaggagatcgcttccctttggccggaggttctctgtcatctt
cgagaagagcaagtttataatttgcctttggagtctcagaagagtcaaaatgaggatttt
cttgcattatcatatacttccaaatccagagatggccatttagatcttgtaatgacagag
aatactcggatggaattgggttgtagtggtgcattacgtattacgaagtcttcatgtctt
actgcggatagctcctttactttggaagcttgctcctcaaatgctcagatggaattgaat
tgtaggggtgcattacgtattgcaaagtcttcatgtcttagtgcagatagctccttggaa
ccttgctcctcaactggatacccagtgtataagcgaggcctagatggatcagaaccgaat
atgaatttttatgagggaggcctagatggatcagaaccaaatatgaatgcttataaggga
ggcctagatggatcagaaccaaatatgaatgcttataagggagacctagatggagcagaa
ccaaatatgaatatttttacaatgccgccgctaagattcggggagaggtttgaggaagca
tacgaagtaattttggtattggatgatcgggagcattttgcttctcatgggtctcgggct
gggaaaattattgagaacattcgctctcagttcaaaattcgaattgaggttagacgattg
cctgtgggagatggaatctggatagctagggacaaacaactacgtgttgaatatgttctc
gattttattgttgagaggaagaacgttgttgatttacactgctcaatcagggacaatcgc
tatagggatcaaaaactacgacttatgagatgtggactcaagaagcttatatatatggtg
gagggtgacccaaattcatctgaagctgcagaaagcatcaaaacagcttgtttcacaaca
gagattttggaaggatttgatgtgcagagaacaagtggcttgggtgatacactgagaaga
tacggttatcttacccaggcgattactcaacactgcaaattactgtctgctaaaggccaa
cggaatagcttgggggtctgtcccacatttggagacttcattagaaggtcccaaaacttg
gataagatgacagtcagtgatgtatttgccatccaacttatgcaggttccacaggtaaca
gaggagcttgccattgctgttcttgatttgtaccctactctgatctctcttgctcgtgca
tactctcttcttgaaggtgacctttgtgcacaagaagaaatgctgaagaagcagagtaac
aacattattagtggtgctgccagcaaaaatatcttcaaactagtctgggggagctga
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