Rhododendron vialii: 131334878
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Entry
131334878 CDS
T09330
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131334878
Enzymes [BR:
rvl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
131334878
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
131334878
Prokaryotic type
131334878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
131334878
NCBI-ProteinID:
XP_058226163
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All DBs
Position
7a:34372048..34377726
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AA seq
493 aa
AA seq
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MAQSNTTVQPGRIRVLKKGSRPLGHRGAAGPVVYWMFRDQRVRDNWALIHAVDEANKANV
PVAVVFNLFDQFLGAKARQLGFMLRGLQQLHTCIQDTLHIPFFLFQGEAIETIPNFIEEC
GASLLVSDFSPLREVKCWKEEICKRVSDSVSVHEVDAHNVVPLWVASEKLEYSARTIRGK
INKLLPEYMIDFPKLGPPIKKWASTNHVVDWENLITAVIRKGAEVPELEWCEPGEDAAME
VLMGNRNGFLTKRLKGYSSDRNNPLKPKALSGLSPYLHFGQISAQRCATEARRVRTLCPQ
AVDVFLEELIVRRELADNFCFYQPQYDSLKGAWEWARKTLMDHASDKREHIYTRGQLEKA
QTADPLWNASQLEMVHCGKMHGFMRMYWAKKILEWTSGPEEALAISIYLNDKYEIDGRDP
SGYVGCMWSICGVHDQGWRERLVFGKIRYMNYAGCKRKFDVDGYISYVKRLVGEIKKRKA
VPLFNGKEKELRI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccaacactaccgtccaaccgggcaggattagggttctgaagaaagggtct
cgaccgttgggtcatcgaggtgcggcgggaccggtggtgtactggatgtttagagatcaa
cgggtgagggacaactgggcgttgattcacgccgtcgatgaggcgaacaaggccaatgtc
cccgtagctgtggtattcaatctttttgatcagttcttgggtgccaaggccagacaatta
gggttcatgttgaggggtctccagcaactccatacctgtatccaagacactcttcacatt
ccattcttcttgtttcagggagaagctatagagacgattcccaattttatcgaagaatgt
ggtgcttcactcttggttagtgacttctcgccattacgagaagttaaatgttggaaggag
gaaatctgcaaaagggtgagtgattcagtgtcagttcatgaagttgatgctcacaatgta
gtacctctttgggtagcatccgagaaattggagtacagtgctaggactattaggggtaag
attaataaattgcttcctgagtacatgattgattttcctaagctggggccaccaattaaa
aagtgggctagcacaaatcatgtggtagattgggagaacctcattacagcagtcataagg
aaaggagcagaagttcctgaacttgagtggtgcgaaccaggtgaagatgcagcaatggaa
gtcttgatgggaaatagaaatggattcttgacaaagagattaaagggctactcttcggac
aggaataaccctttgaaacctaaagctctttctggtctctctccgtatttgcattttggg
cagatatcagcgcagcggtgtgctacagaggcacgtagagtcaggacgctttgccctcag
gcggttgatgtattcttggaggagctgatcgtccgaagggaacttgcggataacttttgt
ttttaccagcctcagtatgattctttaaaaggagcatgggaatgggcacgtaaaaccttg
atggaccatgcctctgataagcgagaacatatttacacgagagggcaattggagaaggca
caaactgctgatcctctatggaatgcttctcagttggagatggttcattgtggaaagatg
catggctttatgaggatgtactgggcaaaaaagattcttgaatggacaagtgggcccgaa
gaggcccttgcaatatcaatatatcttaatgacaagtatgaaatagacgggagggatcca
agtggatatgttggttgcatgtggtcgatttgcggtgtgcatgatcagggttggcgagaa
cgcctggtgtttggcaaaatacgctacatgaactatgcaggctgcaagagaaaatttgat
gttgatggatacatttcttatgttaagaggctagtaggtgaaatcaagaagagaaaagcc
gtccccctgttcaatggaaaggaaaaagaacttcgcatttaa
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