KEGG   Rhododendron vialii: 131335052
Entry
131335052         CDS       T09330                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
rvl  Rhododendron vialii
Pathway
rvl03013  Nucleocytoplasmic transport
rvl03015  mRNA surveillance pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131335052
  09122 Translation
   03013 Nucleocytoplasmic transport
    131335052
   03015 mRNA surveillance pathway
    131335052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131335052
   03041 Spliceosome [BR:rvl03041]
    131335052
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131335052
Spliceosome [BR:rvl03041]
 Complex C
  Other components
   EJC/TREX
    131335052
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_Nup35 RRM_occluded
Other DBs
NCBI-GeneID: 131335052
NCBI-ProteinID: XP_058226251
LinkDB
Position
1a:complement(37039583..37044202)
AA seq 193 aa
MANTEVEAVDFEPEDDDLMDEDGGVDVDAAPMPKLKSAITGGASEPKRTKGRGFRQETDA
ADRNTRLAGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHL
NLDRRTGFVKGYALIEYENRDEAQKAISEMDGTELLTQNITVDWAFSRGPFKRRNMRRRS
PRGHRSRSPRRRF
NT seq 582 nt   +upstreamnt  +downstreamnt
atggctaatacagaagtggaagcggtggacttcgagccggaggacgacgatctcatggac
gaggacggcggcgtcgacgtggacgctgctcctatgcccaagctcaaatccgccatcact
ggcggcgcctccgagcccaagaggaccaaaggccgtggctttcgacaagagaccgacgca
gccgatcgaaacacccgcttggctggtcgattcgactccctcgactccgatggcgggccc
ggtcctgaacgatccattgaaggatggattattctggtcactggagttcatgaagaggca
caagaagatgatctgcaaaatgcatttggtgaatttggggagattaagaatttgcatttg
aatcttgatcgtcgaactggttttgtcaagggctatgcgctaattgaatatgagaaccgt
gacgaggcacaaaaagctataagtgaaatggatggaaccgagctgctcacccaaaacatc
actgtcgattgggccttcagcaggggtccgtttaaaaggaggaacatgaggaggagatca
ccacgtggacaccgatcaagaagtcccaggaggagattctag

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