Rhododendron vialii: 131335052
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Entry
131335052 CDS
T09330
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131335052
09122 Translation
03013 Nucleocytoplasmic transport
131335052
03015 mRNA surveillance pathway
131335052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131335052
03041 Spliceosome [BR:
rvl03041
]
131335052
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131335052
Spliceosome [BR:
rvl03041
]
Complex C
Other components
EJC/TREX
131335052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_Nup35
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131335052
NCBI-ProteinID:
XP_058226251
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All DBs
Position
1a:complement(37039583..37044202)
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AA seq
193 aa
AA seq
DB search
MANTEVEAVDFEPEDDDLMDEDGGVDVDAAPMPKLKSAITGGASEPKRTKGRGFRQETDA
ADRNTRLAGRFDSLDSDGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHL
NLDRRTGFVKGYALIEYENRDEAQKAISEMDGTELLTQNITVDWAFSRGPFKRRNMRRRS
PRGHRSRSPRRRF
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggctaatacagaagtggaagcggtggacttcgagccggaggacgacgatctcatggac
gaggacggcggcgtcgacgtggacgctgctcctatgcccaagctcaaatccgccatcact
ggcggcgcctccgagcccaagaggaccaaaggccgtggctttcgacaagagaccgacgca
gccgatcgaaacacccgcttggctggtcgattcgactccctcgactccgatggcgggccc
ggtcctgaacgatccattgaaggatggattattctggtcactggagttcatgaagaggca
caagaagatgatctgcaaaatgcatttggtgaatttggggagattaagaatttgcatttg
aatcttgatcgtcgaactggttttgtcaagggctatgcgctaattgaatatgagaaccgt
gacgaggcacaaaaagctataagtgaaatggatggaaccgagctgctcacccaaaacatc
actgtcgattgggccttcagcaggggtccgtttaaaaggaggaacatgaggaggagatca
ccacgtggacaccgatcaagaagtcccaggaggagattctag
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