Rhododendron vialii: 131335352
Help
Entry
131335352 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131335352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131335352
03036 Chromosome and associated proteins [BR:
rvl03036
]
131335352
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131335352
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131335352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
131335352
NCBI-ProteinID:
XP_058226663
LinkDB
All DBs
Position
8a:complement(31704727..31713585)
Genome browser
AA seq
1045 aa
AA seq
DB search
MEVVVGASDSPILFESQNKKRRISLDSIDSSLSCEVLSEINASLPTLQSSDYFIEPCLSE
LATRELIHPGYCSRVKDLKVGRLGYGYVKFTGETDVRSLNLNEIIKFSRHEVVVYEDEST
KPEVGQGLNKAAEVTLTLQIRSSMDYGEERYREVARKLRLSTERQGACFISFEPSNREWK
FLVHHFSRFGLSGDEEEDMIVDDATAEGQGLEEMRGGEVSDIDEEPATSDSTPLSHSLPS
HLGLDPVRMKEMRMLMFPSEEEEVEDLHGRFSHQKVAFSKDNLRSPLQDSASKMIYRSSP
TVVRKTPLALLEYKPGNYESSSPGTILLAQQKKGMPLKTTKREGFRLDLEHETPVTGSHS
RNIVDAALFMGRSFRVGWGPNGMLVHTGAPVGSSDPQRVLSSVINVEKVAIDKVVRDENN
KVGKELTEFCFDSPLNLHKEINHESKEVKVGSFKIKLLKLVSNRLMLPEICRSYIGIIEK
QLEVPGLSSSARVVLMHQVMVWELIKVLFSDREMSGQLNLVGADNEEDMMNDRKEESPEV
DSEALPLIRRAEFSYWLQECVCHRVQEEVSSLNESNDLEHIFLLLTGRQLDPAVELAASR
GDVRLACLLSQAGGSTVNRHDMARQLELWRINGLDFNFIEKDRIRLYELLAGNIEGALQD
IQVDWKRFLGLLMWHQLQPDTSLHIVFHTYQQLLEDGRAPYPVPVYIDEGPLEEAANIDT
GEHLDLAYYLMLLHASEKGKFGALKTMFSAYASTYDPLDYHMIWHQCAVLEAVGAFSSND
LHVLDMGLVSQLLCMGQCHWAIYVVLHMHHRDDFPYLHANLIREILFQYCEAWCTQELQC
QFIEDLGVPAAWLHEAMAVYFHYYGEISKALEHFLACENWQKAHSIFVTSVAHSLFLSAK
HSEIWRLATSMEDHKSEIEDWDLGAGIYISFYVLRSSLQEDNDTMSEMDTLESKNDACRD
FFGRLSESLAVWGSRFPVDARVAYSKMAEEISNLLLSDSGEGSTRGVQLSCFDSVFSAPI
PEDLRSCHLQDAVSLFTCYLSEAAS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggttgtgggagcttctgactccccaatcctttttgaatcacaaaacaagaaa
cggaggatttctctggatagtatagattcttctttgtcatgcgaggttttgagtgagatc
aatgcttcattgcccactttgcagtcttctgattattttatagaaccttgtttaagtgag
ttggccactagggagctcattcatccaggatattgcagtcgggttaaagatctaaaagtt
ggaaggcttggatatggatatgtgaagtttaccggggagactgatgttaggtcattgaat
ttgaatgaaattatcaagttcagtcgccacgaggtagttgtatatgaggatgaaagcacg
aagcctgaggttggtcagggcctcaacaaggcagctgaagtaactttgacgttgcaaatt
agatcatcaatggattacggggaggagcgatatagagaagtagcaaggaaattgaggctc
agcacagagagacagggagcatgctttatttcatttgaaccatcaaacagagaatggaaa
ttcttggttcaccattttagcagatttggtttgtctggggacgaagaagaagatatgata
gtggatgatgcaactgcagaaggacaaggtcttgaggagatgcgtggtggcgaggtttct
gatattgatgaagaacccgctacgtcagattcaactcctctgtcacattctcttccttct
catcttgggcttgatcctgtcaggatgaaagaaatgcgaatgctgatgtttccttcagag
gaagaggaggttgaggatttacatgggaggttttcacatcagaaggtggcgttcagtaag
gacaacttaaggtcacctttacaggattctgcttcaaagatgatatataggtctagtccc
acggtggtgcgaaaaaccccactagctttgctcgagtacaaacctggtaactatgagtcc
agttctcctggaaccattttattggcccaacaaaagaaaggcatgcctctgaagacaaca
aaaagagaaggttttagactggacctagagcacgaaacaccagttactggaagccattct
cgtaacattgttgatgcagcattgttcatggggaggtcgtttcgggtgggttggggtcct
aatggtatgctagttcacactggtgcgccagtaggtagcagtgatcctcagagggtatta
tcatctgttatcaatgtggaaaaggttgcaattgacaaagtggtcagagatgaaaataac
aaagtaggaaaagaacttactgaattttgttttgattctccattgaatcttcacaaggag
ataaatcacgaatcaaaagaagtgaaagttggctccttcaaaataaagcttcttaaactt
gtttctaaccggttgatgcttcctgagatttgccggagctatataggaattattgaaaag
cagctggaagttcctggattatcctcgtcagcccgtgtagttttgatgcaccaagtaatg
gtttgggaattaataaaggtacttttttcggatagggaaatgagtgggcagttgaatttg
gtgggagctgataacgaggaagacatgatgaatgataggaaggaagagtctccagaagtc
gactccgaagcacttcccttaattcgtagagcagagttcagttattggttgcaagagtgt
gtttgccaccgtgtgcaagaagaagtaagctctttgaatgagtcaaatgacttagaacac
atattcttacttctaacagggcgtcagctagacccggctgtggaactagccgcttctaga
ggcgatgtgagactggcttgtctgttaagccaggctggcgggtccaccgtaaatcgtcac
gacatggctcggcagcttgagctttggagaatcaatggtcttgatttcaattttattgaa
aaggacaggataaggctttatgagttgcttgctggtaatattgaaggggctttgcaagac
atacaagtagactggaaaaggttcctggggttgctgatgtggcatcagctccaacccgac
acttcattgcacattgtttttcacacttatcagcaacttcttgaagatggaagagctcca
tatccagtaccagtttacatcgatgaaggacctctagaagaggctgcaaacattgatact
ggtgaacaccttgacctcgcgtattatctcatgctgcttcatgctagtgaaaagggcaaa
tttggtgctctgaagacaatgttcagtgcttatgcttcaacctacgatccgcttgactat
catatgatctggcatcagtgtgcagttttagaagcagttggcgctttcagctctaatgat
cttcatgttcttgacatgggacttgtttcccagcttctctgtatggggcaatgtcactgg
gctatctacgtggtgcttcatatgcatcatcgtgatgattttccatatctccatgctaat
ctaattagagaaatcttgttccaatactgcgaagcttggtgtactcaggaactacagtgc
cagtttattgaggatttgggtgttcctgcagcatggttgcatgaggctatggcagtgtat
ttccattactatggtgaaatttcaaaggcccttgaacactttcttgcatgtgaaaattgg
caaaaggcgcactcaattttcgtaacttcagttgctcattccttgttcttgtcagccaaa
cactcagagatttggaggcttgcaacttccatggaggaccacaagtcagaaattgaagat
tgggacttgggagctggaatatatatttcattctacgtgttgagaagttccttacaagaa
gataatgataccatgagtgaaatggatacccttgagagcaaaaatgatgcttgtagagac
ttctttggtcggctgagtgagtctttggccgtttggggtagcagatttcctgttgatgca
agagtggcatactcgaagatggctgaggagatcagcaacttgcttttatcggacagtggt
gagggttcgactcgtggggtccagctaagctgcttcgatagcgtctttagtgcacccatc
cctgaagaccttcgatcgtgccatttacaagacgcagtatcgttgtttacgtgttatctt
tctgaggctgcctcatag
DBGET
integrated database retrieval system
