KEGG   Rhododendron vialii: 131335452
Entry
131335452         CDS       T09330                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rvl  Rhododendron vialii
Pathway
rvl03020  RNA polymerase
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131335452
  09124 Replication and repair
   03420 Nucleotide excision repair
    131335452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rvl03021]
    131335452
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131335452
Transcription machinery [BR:rvl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131335452
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131335452
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 131335452
NCBI-ProteinID: XP_058226776
LinkDB
Position
8a:32497126..32503147
AA seq 202 aa
MAEKGGKGFSLPKSSLKSPAHLKGKDDSPAKSKSGRKVQFDSEGDWGKGGKGDKVANGGK
SSMPKGSSTSRQKNEQELPKNAKCLMDCEAADIVQGIQEQMVVLSEDPTIKIPIPFDRGL
QYAKNGSRYTDPESVRQVLEPLKAHGVSDSEICMIANICPESLDEVFALIPSLKGKKNKV
TQPLKDALSELTKLKQSTRSSN
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcagagaaaggaggaaaagggttctccctgcccaagtcttctctcaaatctcccgct
catttgaaagggaaggatgatagcccagcaaagtcaaagagtgggcgaaaagttcagttt
gattctgaaggtgattggggaaaaggggggaaaggagacaaggttgcaaatggtggcaag
agctcaatgccaaaaggatcttccacatccaggcaaaaaaatgagcaggaacttccaaag
aacgccaaatgtctgatggactgtgaggcagcagatattgtacaaggaatccaggagcaa
atggttgtactatctgaagatccaacaattaaaatcccaataccatttgataggggcctc
cagtatgctaagaatggtagccgctatacagaccctgaatctgttcgacaagtgcttgag
cctctcaaagcacatggcgtttctgacagcgagatatgcatgattgccaatatatgtcca
gagtctttggatgaagtttttgccctaatcccatccttgaagggtaagaaaaacaaggtg
acacaacccctcaaagatgcattgagtgaattaactaaacttaagcaatcgacacgaagt
tccaactga

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