Rhododendron vialii: 131335464
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Entry
131335464 CDS
T09330
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rvl04812
]
131335464
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
131335464
Cytoskeleton proteins [BR:
rvl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
131335464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_33
AAA_22
AAA_16
Mg_chelatase
AAA_14
AAA_28
IstB_IS21
RNA_helicase
AAA_17
PhoH
AAA_2
TsaE
AAA_7
nSTAND3
NPHP3_N
AAA_24
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
131335464
NCBI-ProteinID:
XP_058226809
LinkDB
All DBs
Position
8a:complement(32634423..32640754)
Genome browser
AA seq
520 aa
AA seq
DB search
MAGTSPAGVQDHLKLARDYAIEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK
ALTEEVEVVKQLDAERRAFKDIPLGRRPPSPPISAKSSFVFQPLDEYPTSSGAPMDDPDV
WRPPSRDNTSRRPTRAGQAGTRKSPQDGAWARGSTKSGTTGRGAKAGNPSRSNTGVRASA
AGKKGTGSGKSGKEDALNGDSEDGKSKRGQYEGPDHDLAEMLERDVLDSTPGVRWDDVAG
LTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV
SSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSEL
LVQVDGVSNTSTNEDGSRKLVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIR
INLRTVEMSTDVDIDKVARQTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKED
ISKDPVAMCDFEEALKKVQPSVSAADIERHEKWLSEFGSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacgtcacctgctggcgttcaagatcacctcaaattggctagagactacgca
attgaaggcctctacgatacctccattatcttcttcgatggcgccatcgcccagatcaac
aagcatttaaacacgcttgatgaccctttgattcgatcaaaatggatgaatgtaaagaaa
gctcttacagaagaagtagaagtagtgaagcagttagatgcagagagaagggctttcaag
gatattcccttgggtagaaggcctccttctcctccgatttctgcaaaatcttcatttgtt
tttcaaccattggacgagtacccgacttcatctggtgctccgatggatgatcctgatgta
tggaggccacctagtagagataatacgagtagaagacctacaagagcaggtcaagctggt
acaagaaagtcacctcaagatggagcttgggcacgtggttccacaaaatctggaacaacc
ggtcgtggagcaaaggctggtaatcctagtaggtcaaatacaggagtccgagcttcagct
gctggaaagaaaggcactggctcagggaaatctggcaaggaagacgcactgaatggtgat
tctgaagatggaaaatccaaacgcggacagtacgaggggcctgatcatgacttggctgaa
atgcttgaaagggatgtcttggattccactcctggtgtgaggtgggatgatgtagctggg
ttgactgaagcaaaaaggcttctagaggaagctgttgttcttcctttgtggatgcctgaa
tatttccagggaattaggagaccatggaaaggcgttcttatgtttgggcctcctggcact
ggaaagacactcttggccaaagcagttgctaccgaatgtggcacaacattcttcaatgtt
tcttcagctactctggcttcgaaatggcgtggggagagtgagcgtatggtgcggtgctta
tttgatctcgcacgagcttatgctccaagtacaatattcattgatgagatagattctctc
tgcaatgcccgtggggcttcaggggagcatgaatcttccaggagagtgaagtctgaactt
ctagttcaagtagatggtgtgagcaatacttccactaatgaagatggtagtcgcaaatta
gtgatggttttggctgctaccaattttccatgggatatagatgaggcgctgaggaggcga
ttggaaaagcgaatatacataccacttccaaatttcgaaagccgtaaggaacttatacgg
atcaatttgagaactgttgagatgtctactgacgtggatatcgataaagtggcgcgccaa
acagagggatacagtggagatgatctcaccaatgtttgccgcgatgcctctttaaatggc
atgaggcgtaaaatagcggggaagacacgcgatgagattaagaacatgtctaaggaggat
atctcaaaggatccagtcgccatgtgtgactttgaagaggccctgaaaaaggttcaaccc
agtgtttctgctgctgatattgaacggcacgagaagtggctttcagaatttggatctgca
tag
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