Rhododendron vialii: 131335787
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Entry
131335787 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131335787
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131335787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131335787
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
GTPases
131335787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
RsgA_GTPase
ECH_1
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
131335787
NCBI-ProteinID:
XP_058227274
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All DBs
Position
8a:complement(34621673..34625540)
Genome browser
AA seq
1024 aa
AA seq
DB search
MGDFDCQKIRNICILAHVDHGKTTLADHLIASYGGGVLHPKQAGRLRFMDYLDEEQRRAI
TMKSSSISLQYKDHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLNPCLVLNKMDRLISELKLSPMEAYNRLQRIVHEVNSIMSAYKSEKYLSDVDSI
LAGPSGEVGNENLEFIEDDEEDTFQPHKGNVAFVCALDGWGFSISEFAGFYASKLGASSA
ALLKALWGPRYFNPKMKMIVGKKAMGGGSKARPMFVQFVLEPLWQVYQAVLEADGGKGVL
EKVIKSFNLSIPPRELQNKDPKAVLQSVMSRWLPLSDTILSMVVKCMPDPIAAQSLRIAR
LIPKREVLSDGIVSEVLAEAELVRKSVELCDSSPEAPCVAFVSKMFAVPSKMLPQRGVNG
EFVNNSADDGESDECFLAFARIFSGVLCSGQRVFVLSALYDPLKGESMQKHVQEAELHSL
YLMMGQGLKPVASAKAGNVVAIRGLGQHILKSATLSSTKNCWPFSSMVFQVSPTLKVAIE
PTDPADMVALMKGLRLLNHADPFVEVTVSSRGEHVLAAAGEVHLERCIKDLKERFAKVSL
EVSPPLVSYKETIEVEAFHPLDYLKFLSCSSDYIERTTPNGRCVVRVQVVKLPPALTKVL
DDSSNVLGGIIGGKSGHTSDKSLETQRTSIVEDDNPNEVLKKRISDAIESDMPSGIADID
KEKWNIVWERLLKRIWALGPRQVGPNMLLTPDDYKGKTTESVLVRGSPLVSERLGFVGVC
SNGDEALEASSVATHALYQEAETLENSVISGFQLATAAGPLCEEPMWGLAFIVEACISPL
IGQLNESETPHQQPEQYGILTGQVMTTVKDACRTAVLQKKPRLVEALYFCELNTPTEYLG
PMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVAESFGFADELRRWTSGASSALLVFSHW
EALYEDPFFVPKTEEELEEFGDGSNVPPNTARKLIDAVRRRKGLPVEEKVVQHATKQRTL
ARKV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactttgattgccaaaaaataagaaacatatgtattctggcccatgttgatcac
ggcaagaccacgcttgctgaccatttgattgcctcgtacgggggcggcgtactccacccg
aagcaagcgggtaggcttaggtttatggattacctcgatgaagaacagaggcgtgcaata
acgatgaagagttcttcgatatctcttcaatacaaagaccattcaataaaccttatagac
tcccccggtcacatggacttttgtagtgaggtttccactgctgcccggttgagtgacggg
gctttagtcttggtggatgccgttgagggtgtccacattcagacacatgcggtcttgcgc
caagcttggattgaaaagcttaatccttgtttggtgctaaataagatggataggttgatt
tctgaactaaagttgagtccaatggaggcttataatcgtttgcaaaggattgttcacgag
gtcaattctattatgagtgcttacaagtcggagaagtatctttcagatgtagattccatt
ctggcggggccctctggtgaggttggcaatgagaatcttgagtttatagaggatgacgag
gaagatacatttcaaccccacaaggggaatgttgcttttgtgtgtgcactggatggctgg
ggtttcagtattagtgagtttgcagggttctatgcttcaaagcttggggctagctcagct
gcgttacttaaagccctatggggccctcggtatttcaatcccaagatgaagatgattgtg
ggtaagaaggcaatgggtggaggaagtaaagctcgccctatgtttgtgcagtttgtgctt
gagcccctttggcaggtttaccaggcggttttagaagctgatggaggcaaaggggtactt
gagaaagtcattaaatcgttcaacttgtctatacctcctagggaacttcagaacaaggat
ccaaaagcggtgcttcaatctgtcatgagtcgctggcttcctttgtcagatactatcttg
tctatggttgtgaagtgtatgccagacccaattgccgcccaatctttaaggatagcacgg
ttgattccaaagagagaagttttaagtgacgggattgtctctgaagtgcttgctgaagca
gagcttgtaagaaaatctgttgagctttgtgattcaagtcctgaagccccgtgtgttgct
tttgtatctaagatgtttgctgttccttcgaaaatgctacctcaaaggggcgtaaatggt
gagtttgtgaataattctgctgatgacggtgagtcagatgagtgcttccttgcatttgca
cgaatttttagcggtgttctttgttcaggacaacgggtttttgtactttcagctttgtat
gacccattaaaaggggaatcgatgcaaaagcatgtccaagaagctgagttgcattcgttg
tatctgatgatgggtcaaggcttgaaaccagtggcgtctgcaaaggctgggaacgtggtg
gctattagagggcttggccagcatatattgaaaagtgcgactctttcatctactaagaac
tgttggcctttctccagtatggtgtttcaggtttctcccactcttaaagttgcgattgag
cccaccgatcctgctgatatggtggcactcatgaaaggtttaaggctattgaaccatgcg
gacccatttgtagaggtcactgtttcttctagaggagagcacgtgcttgctgcggcagga
gaggttcaccttgagagatgcataaaagatttgaaggagagatttgcaaaagtaagcttg
gaagtttctcccccactagtctcctataaagagaccattgaagttgaggcgttccatcca
ttagattatttgaagtttttaagttgcagctctgattacattgagaggacaacaccaaat
ggtagatgtgttgttcgagtgcaggtcgtgaagcttccacctgctctaactaaggtgctt
gatgatagttccaatgtgctaggaggcattattggaggtaaatcgggtcatactagtgac
aaaagcttggaaactcagagaacaagcatcgtggaagacgacaacccaaatgaagtgctt
aagaaacggataagtgatgctatagagagtgatatgccatctggaattgcagatatcgac
aaggagaagtggaatatagtgtgggaaaggttgcttaagagaatctgggcgctaggtcct
cgacaggttggtcctaacatgctcctcacacccgacgactacaaaggaaagacaacggaa
tctgttcttgtccggggttcacctcttgtgtctgaaagattaggttttgtgggtgtatgt
agcaatggtgatgaagcgctggaggcatcatctgtggcaactcatgcactgtaccaagaa
gcggagactcttgagaacagtgttatctctggatttcaactagctacagcagctggccct
ttgtgcgaagaacctatgtggggtttggcattcattgtcgaggcttgtatttctccattg
attgggcaattaaatgaatctgaaactcctcatcaacaaccggaacaatatgggatcttg
actgggcaggttatgacaactgtcaaggatgcttgtaggacagccgtacttcagaagaaa
ccccggctcgtcgaggccttgtatttctgtgaactgaacactccaactgagtacttgggc
cccatgtatgcagtgcttgctaggaggcgggcccgagttttgaaggaggaaatgcaggaa
ggttctccgttgttcactgtgcacgcttatgtgccagttgctgagagctttggctttgcg
gatgagttgaggagatggacttctggggcttcgagtgctctgcttgtttttagtcattgg
gaagcactgtatgaggatcctttctttgtgcccaagacagaagaagagcttgaagagttc
ggagacggttctaatgttccacctaatacagcgaggaaactcatcgatgctgtgaggcgg
cggaagggtcttccggtggaggaaaaggtagtccaacatgctacaaagcagaggacccta
gcccgtaaagtgtag
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