Rhododendron vialii: 131335875
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Entry
131335875 CDS
T09330
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131335875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131335875
03009 Ribosome biogenesis [BR:
rvl03009
]
131335875
04131 Membrane trafficking [BR:
rvl04131
]
131335875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131335875
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131335875
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131335875
Membrane trafficking [BR:
rvl04131
]
SNARE
SNARE associated proteins
Others
131335875
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131335875
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131335875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_5
AAA_33
AAA_14
AAA_22
CDC48_2
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
AAA_28
Parvo_NS1
ATPase_2
AAA_18
Viral_helicase1
ABC_tran
IstB_IS21
AAA_7
NACHT
ResIII
AAA_24
NB-ARC
TsaE
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Vps4_C
Cytidylate_kin2
Zot
Motif
Other DBs
NCBI-GeneID:
131335875
NCBI-ProteinID:
XP_058227410
LinkDB
All DBs
Position
8a:28190258..28195845
Genome browser
AA seq
819 aa
AA seq
DB search
MADPSPSSQNPGHPPPSSSDSKSDKKDYSTAILEKKKSPNRLIVDEALNDDNSVVCMHPA
KMDALQFFRGDTILIKGKKRRDTIGIALVDEHCEEPKIRMNKVVRANLRVRLGDVVSVHQ
CPDVKYGKRVHILPIDDSIEGLTGNLFDVFLKPYFLEAYRPVRKSDLFQVRGGMRSVEFK
VVDTDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLR
HPQLFKAIGVKPPKGILLYGPPGSGKTLIAKAVANETGAFFFLINGPEIMSKMAGESESN
LRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMG
ATNRPNSIDPALRRFGRFDREIDVGVPDEVGRLEVLRIHTKNMKLAEDVDLERAARDTHG
YVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFLTALGASNPSALR
ETVVEVPNVSWADIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT
LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
RGSSIGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI
PLPDEASRLQIFKACLRKSPISKDVDLAALARYTQGFSGADITEICQRACKYAIRENIEM
DIERERKRQENPEAMEEDNVYDVSEIKPAHFEESMKYARRSVSDADIRKYQLFAQTLQQS
RGIGSEFRFPDRPGNSTADGASDPFSSAVAAGDDDDLYS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaagcccatcatctcaaaaccctggtcaccctcctccttcctcgtccgac
tcgaaaagtgacaagaaagattattccactgcaattctggagaagaaaaagtctccaaat
cgtcttatcgtggatgaagctctaaatgatgataattctgtggtttgtatgcaccctgct
aaaatggatgctctccagttctttcgaggagacacaattttgatcaagggtaagaaacga
agagatacaattggcattgctctcgttgatgagcactgcgaagaaccaaaaatcagaatg
aacaaagttgttcgagcgaaccttagggtacgcctcggagatgtcgtatcagttcatcag
tgtcctgacgtgaagtatggaaagcgagttcacatccttccaattgatgactctattgag
ggcctcacaggcaacctgtttgatgtatttttgaaaccatatttcttggaagcctaccga
cctgtgaggaagagtgaccttttccaagttagaggtggaatgcgaagtgttgaattcaaa
gtagtggatacagaccctggtgaatactgtgttgttgcaccagatacagagatcttctgt
gagggagaacccattaaacgcgaagatgaggagagactgaatgaagttggatatgatgat
gttggcggtgtacgaaaacaaatggctcaaatccgtgagctagttgagcttcctttgaga
catccacagctcttcaaggcaattggcgtgaagccccccaaaggtatcctgctttatggt
ccacccgggtctgggaaaacactaattgcaaaagccgtagcgaatgaaacaggcgcattt
ttcttcttgataaacggccctgagataatgtcgaagatggctggtgagagcgaaagcaac
ttgaggaaggcatttgaggaagctgaaaagaatgccccatctatcatcttcattgatgaa
atagattccattgctccgaagagggaaaaaactcacggtgaagtggagaggaggatagtg
tcccaacttttgactttaatggatggccttaagtccagagctcatgtgattgtcatgggg
gctaccaacaggccaaacagcattgaccctgctctgcggagattcgggaggtttgaccga
gagattgatgtcggtgtaccagatgaggtgggaaggttggaagtccttcggatccataca
aaaaacatgaaacttgctgaagatgttgatcttgaaagagccgcaagagatacgcatggt
tatgttggtgcggatcttgctgctctttgtactgaggctgctcttcagtgcattagagag
aaaatggatgtcattgacctggaggatgagacaattgatgctgaagtattgaattccatg
gctgtttctaacgagcacttcctaacggctttgggggcttccaatccctctgcccttcgt
gaaactgttgtggaggttcccaatgtgtcctgggcggatattggtgggttggacaatgtt
aagagagagcttcaagagactgtccaatatccagtggagcatccggagaagttcgaaaaa
tttggcatgtctccttccaagggagttctcttttatggtcctcctggatgtgggaaaacc
ttgcttgccaaggcaatcgctaatgagtgccaggctaacttcataagtgtcaagggaccc
gagttgctaacaatgtggtttggagaaagtgaggcaaatgtccgagagatattcgacaag
gcacgccagtcggctccgtgtgtccttttctttgatgaactcgattctatcgctactcag
cgtgggagttcaataggagatgctggtggtgctgcggatagagttttgaaccaactactg
acagaaatggacggtatgacggcaaagaaaacagtatttatcataggggcaacaaacagg
ccagacattattgatccggcattactcaggcctggacgtctagaccagttgatttacatc
ccactcccggatgaggcttctcgtcttcagatttttaaagcgtgcttacgaaagtctcca
atctctaaggatgttgacctggctgcgcttgcacggtatacgcaagggtttagtggggcc
gacataactgaaatttgccagcgtgcctgcaaatatgccattagagagaatattgaaatg
gatattgagagagagagaaagaggcaagagaaccctgaagcaatggaagaagacaacgta
tatgatgtttctgaaattaagccagcacattttgaagagtcgatgaagtacgcccgccga
agtgtcagcgatgcagatattaggaaataccagttgtttgctcaaactctacagcaatcg
cgtggaattggatccgagtttcggtttccagatcgcccaggcaattcaacagcagatgga
gcttcagaccctttttcgtctgccgtggctgccggagacgacgatgatctgtacagctga
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