Rhododendron vialii: 131335906
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Entry
131335906 CDS
T09330
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131335906
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
131335906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
AAA_18
nSTAND3
AAA_14
Viral_helicase1
NPHP3_N
Cytidylate_kin
AAA_28
ATPase_2
NACHT
AAA_2
TIP49
AAA_5
ABC_tran
RNA_helicase
AAA_30
TsaE
DUF815
RuvB_N
AAA_11
AAA_24
AAA_33
AAA_17
KAP_NTPase
AAA_7
Rad17
SLFN-g3_helicase
nSTAND1
AAA_RNF213_4
NB-ARC
bpMoxR
IstB_IS21
PduV-EutP
AAA_19
AAA_3
SRPRB
Cytidylate_kin2
Mg_chelatase
nSTAND6
ResIII
CPT
NTPase_1
Motif
Other DBs
NCBI-GeneID:
131335906
NCBI-ProteinID:
XP_058227445
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All DBs
Position
8a:28541404..28549153
Genome browser
AA seq
464 aa
AA seq
DB search
MSTPMEISLQNPTTGGDISEHNGGNASEQNGAVTEAAVPSPIFSEDKFLVSVEVCLKPSS
TARIEDVRSSVERMLENRSLSYVDGPVPVPLDDSFLVENVQRICICDTDEWVENHDILLF
WQVKPVVHVFQLSEEGPCEELSEDGQHSTFNEWILPAKEFDGMWDSLIYESGLKQRLLRY
AASALLFSEKGVDPFLISWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEV
NAHSLFSKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSD
SIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILR
SCLQELLRTGILSNSQDCNDLILPNYASSKEKLNMPTHDTQAPTDLSKQLIEAAEACEGM
SGRSLRKLPFLAHGAFASPYNCDPAKFLCAMVDTARRERSELPE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcactccaatggagatctctctgcagaaccccaccaccggcggcgacatttcggag
cataacggcggcaacgcctccgagcaaaacggcgccgtcacggaggcggcagttccctct
cctattttcagcgaagacaaatttctcgtctcagttgaagtttgcttaaagccctctagc
acagctcgaattgaagatgttcgctcatctgttgagagaatgcttgaaaatcggagttta
agttatgtggacggtccagtaccagtccctctggacgattcattcctcgtggagaatgta
caaagaatctgcatttgtgacacggatgaatgggtggagaaccatgatattcttctgttt
tggcaagtcaaacctgttgtacatgtctttcagcttagcgaggaaggaccatgtgaagaa
cttagtgaagatggacaacattctacctttaatgaatggattcttcctgcaaaagaattc
gacggaatgtgggacagcctgatatacgaatctggtctcaagcagaggttgttgcggtac
gcagcaagtgctttgctctttagtgaaaaaggtgttgatccttttcttatatcatggaac
cgcattattcttctacatggacctcctggtacaggaaagacatctttgtgcaaagcactt
gctcagaaactatctatacgcttcagctccagatacccacaatgtcaactggttgaagtt
aatgcgcattctttgttcagtaaatggttttctgaaagtggcaagttggttgcaaagctt
ttccaaaaaattcaggaaatggttgaggaagaaaataatctggtatttgttttgattgat
gaagtcgaaagccttgctgctgctagaaaggctgccttgtctggttctgaaccttcagac
tctatacgggttgtgaatgctctacttacccagatggacaaattgaaatcctcaccaaat
gtgattattctcacaacgtccaatatcactgctgctattgatatagcttttgtggatcgt
gccgatatcaaagcgtatgtaggtcctccaactcttcaagcgcgttatgaaatactaagg
tcctgcttgcaggagctgttaagaacaggaatcttatcaaattcccaggattgcaatgat
ctcattcttcctaattatgctagctcaaaagagaagttaaatatgccgacacatgacact
caagccccaacagatctttcaaaacaactcattgaagccgcggaagcctgtgaggggatg
agtggcagatcattaagaaagcttccgttcttagcacacggggcttttgccagtccttac
aactgtgaccctgccaaattcttgtgtgcaatggtagatactgctagaagagaacgttcg
gagctgcctgagtaa
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