Rhododendron vialii: 131335928
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Entry
131335928 CDS
T09330
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
rvl
Rhododendron vialii
Pathway
rvl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131335928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131335928
03029 Mitochondrial biogenesis [BR:
rvl03029
]
131335928
Membrane trafficking [BR:
rvl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131335928
Others
Rab GTPases of specific organelles
Auto phagosome
131335928
Mitochondrial biogenesis [BR:
rvl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131335928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
ATG16
NBCH_WD40
Nup160
eIF2A
Ge1_WD40
WDR54
Cytochrom_D1
PROPPIN
GlnR_1st
HMMR_N
Motif
Other DBs
NCBI-GeneID:
131335928
NCBI-ProteinID:
XP_058227473
LinkDB
All DBs
Position
8a:28964710..28968946
Genome browser
AA seq
514 aa
AA seq
DB search
MDFFRSQDEEIALNAIKHAVKALRKRHLLEESAHAPALIALYKPLAYQGSVWKEKAENLE
VELQHCYKAQAQLSEQLVAEVAESRASKASVQQREATILDVQNELTKARDECSHLTELLE
EKNKALELVISENEELKTQLEEITARAKNAEGENKTFIDRWMLEKMRDAERLNEANALYE
DMLGQLKARGIEQLARQQVDGVVRRSEEGAEYYAESAVPTVSKHHIHAHEGGCAAIVFEN
SSGTLASGGQDKTIKIWDTDTGSLRRTLCGCLGSILDLAITNDNSSIIAASSSNNLYIWD
ADSGRMNHTLKGHKDKVCAVDTSKVSRFHVVSAAYDRTIKVWDLHKGKCINTIIFHSNCN
AICFSIDGQTICSGHVDGSLRLWNMQTGKLLSEVAAHSLAVTSISLSRSGNVILTSGRDG
LHNLFDVRSLEVCSTLKASGYKMASNWSRSCISPDENYVAAGSADGSVYIWSVSKASIVS
TLKEHTASVLCCSWGGVGKPLASSDKNGIICTWT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcaggtctcaagacgaagaaatcgctctgaatgcaatcaagcacgctgtg
aaggctcttcggaagcggcacttgctcgaagagagcgctcatgccccagctctcatcgct
ctctacaagcctctggcttatcagggctcagtatggaaagagaaggcagaaaatcttgaa
gtcgaacttcaacattgttacaaagctcaagctcaattatctgaacagcttgtggcggaa
gtggccgaatccagagcttcaaaagcttcagttcaacagagagaagccacaatcttggat
gtgcagaatgagctcacaaaagcaagggatgaatgctctcatttaactgagctattagaa
gaaaagaataaagcattagaattagtcataagtgagaacgaggaactgaaaactcagttg
gaggagatcactgcgagagctaagaatgctgagggtgaaaataagacattcattgatcgt
tggatgctggaaaaaatgcgggatgctgaacgccttaatgaggctaatgcactttacgaa
gacatgctcggtcaactcaaggcgagaggaatagaacaacttgcaaggcagcaagtcgat
ggtgtggtccgccgaagtgaagaaggggccgaatactatgcagagtctgctgtccccact
gtatccaagcaccatatacatgcacatgaaggtggatgtgctgccatagtttttgaaaac
agttccggtacattggctagtggcggacaagacaagaccatcaaaatctgggatacagac
actggatcccttagacgcactctttgtggttgtctaggctctattcttgatcttgccatt
acgaatgataacagctcaataatcgccgctagcagttcaaacaatttgtacatttgggat
gcagattctggtaggatgaatcatacactaaaaggtcataaagataaagtgtgtgctgta
gacacgagcaaagtctcccgtttccatgtagtaagtgcagcttatgatcgcacaataaaa
gtttgggatctacataaaggtaaatgcatcaacacgataattttccatagcaattgcaat
gctatttgtttcagcatcgatggacagacgatttgctcgggtcacgtggacggtagtctt
cggttgtggaatatgcagacaggaaagctactcagcgaagttgctgcacattcgcttgct
gtgacttcaatatctctttctagaagtggcaatgtgatattgactagcgggagagacggg
ttgcacaatttgttcgacgtgcgatctctggaggtttgtagcacacttaaagctagtgga
tataaaatggcatctaattggagccggtcctgtatcagtccagatgaaaactacgttgct
gctggatctgctgacgggtctgtctatatttggtctgtatcaaaagctagtatagtcagc
actcttaaggaacacactgcttctgttttatgttgttcatggggtggtgttggaaaacct
cttgcttcctctgataaaaatggaattatttgtacgtggacatga
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