Rhododendron vialii: 131335943
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Entry
131335943 CDS
T09330
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131335943
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131335943
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131335943
NCBI-ProteinID:
XP_058227489
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Position
8a:complement(29173996..29176784)
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AA seq
407 aa
AA seq
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MAIPSLLSLIFFFFSLLAAPSIVSSSPVHDPELVVQEVHRSIKNATRRNLGYLSCGTGNP
IDDCWRCDSNWENNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVTPKPGTLRHAV
IQDDPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINV
HDCKQGGNANVRSSPRHYGWRTVSDGDGVSIFGGTHVWVDHCSLSNCNDGLIDAIMGSSA
ITISNNYMTHHDKVMLLGHSDSYSQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSAAPTINSQGNRFLAPDSRNSKEVTKHEDAGESEWRNWNWRSEGDLMLN
GAYFTPSGAGASSSYARASSLGARPSSVVGSITTGAGVLNCKKGSSC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctattccttctctactctctctcatcttctttttcttctctctcctagcagccccc
tccatcgtttcctcctctcctgttcatgaccctgaactagtagtgcaagaagtccacagg
agcatcaagaatgcgacaagaaggaacttgggctatctttcatgtgggaccggcaaccca
atcgacgactgctggaggtgcgactccaattgggaaaacaatcgtcagcggctagcagac
tgcgccattgggttcggcaagaatgccatcggagggcgagacggtaaaatctatgtggtc
accgactccggagacgacgacccagtgaccccaaagccggggaccctgcgccacgctgtc
atccaagacgacccgctctggatcatctttgcgcgcgacatggtgatcaaactgaaggag
gagctgatcatgaactcgttcaaaacgattgacggccggggagcgagcgtgcatatcgcc
ggcggcccgtgcatcaccatacagtacgtgaccaacatcatcatacacgggatcaacgtg
cacgactgcaagcagggagggaacgccaatgtgcggtcctccccgcggcactatgggtgg
aggacggtatcagacggcgacggcgtgtcgatcttcggcgggacccacgtgtgggtggac
cattgctcgctgtccaactgcaacgacgggctgatcgacgcgattatggggtcgtccgcg
attaccatctcgaacaattacatgacccaccatgataaggtgatgctgctggggcacagc
gattcgtatagccaggacaagaacatgcaggtcactattgcgtttaatcactttggggaa
ggcctagttcaaagaatgccaaggtgcagacatggatacttccatgtggtgaacaatgac
tacactcactgggaaatgtatgccattggagggagcgctgcccccaccatcaacagccaa
ggcaaccgttttcttgcacctgatagcagaaacagcaaagaggtgaccaagcatgaggat
gcaggagaaagtgaatggaggaactggaattggaggtcggagggagacttgatgttgaac
ggagcatatttcactccctccggcgcaggggcttcgtccagctacgccagggcttcgagc
ttgggtgctaggccttcttccgtcgtcggttcaatcaccaccggcgccggcgtacttaac
tgcaagaagggctccagctgctga
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