Rhododendron vialii: 131336169
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Entry
131336169 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131336169
KO
K14315
nucleoporin NDC1
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131336169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131336169
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131336169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
131336169
NCBI-ProteinID:
XP_058227885
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Position
8a:complement(14908196..14915895)
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AA seq
550 aa
AA seq
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MPGGFGNGGDAAEEVVKNRFLGFLLWQSVQSTVLYFLCKSLLLSPFVSNPFTPSILGCFA
FFTFHLSLLLFSASLFAVASPQPHTPASPLELVLGLVRAVFVSGGPPPPPEFRRRARISL
TFFLFVASSALSGFLSLISACWNNFGDSVGQKYYWRLLGTLGFRGLAVGFFYGLCYLYKK
RWVLQFPIIQRPPFFSFKMGLPSASLQALKLSTAAYLFSALLSLLLPYEFKGQVTMGKVL
AEHIIFYMAVFVIFLCWELNHHLHQVLHTKRFIFAPAKGSAAAETNPSEPLLAALEESIP
RSLMQYLAYLDLCMVCESDVDAWRRAAFFEETGETYKRVIAICLRPLEQFASKLGEGLES
SSSGKSFQLDHQLRLPTDSQLSSRLHELFNDFQLCVWCARIVASLTIHSHKEDRFGVAQL
SGSNSAVISTLLSCLLAVETFMGKKNSLQSSLGSAGIKWATASTGRRDAAVLGLAAGKRR
GSPLYSKAYCMADVLRTSIYYIVSGFHDEMLTSAKAGLLDKEWITSCKPVYGTRELLLHK
LRLFLDFQAN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagggtttggaaatggaggagacgcggcggaggaagtggtgaagaatcgattt
ctagggtttctcctatggcaatcagttcaatcaacagtcctatacttcctctgcaaatct
ctcctcctctcgcccttcgtttccaaccccttcaccccctccatcctcggctgcttcgcc
ttcttcacctttcacctctctctcctcctcttctccgcctctctctttgcggtggcctcg
ccgcagccccacaccccggcttcccccttggagctcgtcctcggcctcgtccgagccgtc
ttcgtctccggcggcccgccgcctccccctgagttccgtcgccgggccaggatttccctc
acttttttcctcttcgtcgcctcgtctgctctctcgggcttcttgtctctgatttctgcg
tgctggaacaactttggcgactctgttggtcagaaatactactggcggttactgggaacg
ctagggtttagaggccttgccgttgggttcttttacggtctttgttatctctacaagaag
agatgggttttacagtttcctattattcagcggcctcctttcttcagcttcaagatgggg
ctcccttcagcttccctacaggctttaaagctttctactgcagcttacctcttctcagca
ttgttgtcattgttactcccttatgagttcaagggtcaggtcacaatggggaaagtactt
gcggagcatatcatcttttacatggcagtttttgtgatttttctctgttgggaactaaac
catcatttacatcaggtgctacatacgaaaaggttcatatttgctcccgcaaaaggatca
gccgcagcagaaacaaatccaagtgaacctcttcttgcagcattagaggagagcataccc
agatctcttatgcaatatcttgcatatctggatctatgcatggtttgtgagagtgatgtt
gatgcctggcgccgggctgccttctttgaagaaactggtgagacttacaaacgagttata
gctatatgcttgaggcctctggagcagtttgcttccaagcttggagaaggtttagaaagt
agttcaagtggcaagtcattccaactagaccaccaattgcgattgccaacagactcgcaa
ctaagttcaaggcttcatgaactgtttaatgatttccagctatgtgtatggtgtgcccgg
atcgttgcctctctaactatacattcgcacaaggaggaccgatttggagttgctcaactc
tctggtagcaattctgctgtcatctcaacactcctgtcttgcttgcttgctgttgaaaca
ttcatgggtaagaagaacagtttgcagtcctcgctgggctctgctggtattaagtgggcc
acagcgagcacaggaaggagagacgcagctgttctaggcctagcagcggggaaaagaaga
ggtagccctctctactctaaagcatattgcatggctgacgttctaaggacttcaatatat
tacatcgtgtctgggtttcacgatgagatgctgactagtgccaaagcagggcttcttgac
aaggaatggataactagttgcaagcctgtttatgggacccgtgagctcctcttgcacaag
ttacgccttttccttgatttccaagccaactaa
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