Rhododendron vialii: 131336354
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Entry
131336354 CDS
T09330
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131336354
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131336354
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131336354
NCBI-ProteinID:
XP_058228128
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Position
8a:6391579..6395107
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AA seq
441 aa
AA seq
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MQPNCLFVLFFTFAAIIPTLTAHIGDFDEVWQKRAEEAKKAALEANSRNPADFNQHFHKA
LSNGTHLATNATTTRRSLVMRRTYRGRCVATNSIDSCWRCDPNWHLNRKKLAQCALGFGH
GTTGGMAGKFYVVTNPSDNDVANPRPGTLRHAVIQKEPLWIIFKTSMTITLKQELMMQSH
KTIDGRGAKVHIAYGAGITIQFVRNIIIHNIYVHDIKVTYGGMVRDSVDHVGFRTVADGD
GVSLFGASNVWVDHLSMHRCADGIVDVIEGSTAVTISNCHWTDHDKVLLFGARDNNIQDD
SMRITVAYNHFGKRLVQRMPRVRSGIVHVVNNDYTHWEMYAIGGSNHATLISQGNRFIAP
DRPEFKQVTHRDAPEFEWRKWTWRSQGDLFVNGAFFVQSGDPNGPKRLGTLDHVQAKPGA
MVKRLTQFAGVLGGCRPGVAC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaattgtctcttcgtcttatttttcacatttgctgcaataattccaactctc
acggctcatattggcgattttgatgaggtatggcaaaagcgggccgaagaagcaaagaag
gctgcccttgaagccaacagccgcaaccctgctgactttaaccaacactttcacaaggct
ttatctaacggcacccatttggcaacgaacgccaccactactaggagaagcctagttatg
aggagaacgtacaggggcagatgtgtggccaccaactcaatcgacagctgctggagatgc
gacccgaattggcatctcaaccgtaagaagctggcgcaatgcgcccttgggttcggccac
ggcaccaccggcggcatggccggaaagttctacgtcgtcaccaatccttccgacaacgat
gtcgccaaccccagacccggcaccctccgccacgccgtcattcaaaaggagccactatgg
atcatattcaagaccagcatgacgatcacgttgaagcaggagctgatgatgcagagccac
aagacgatcgacggtcgcggagctaaggtccacatcgcttacggcgcgggcatcaccatc
caatttgttaggaacatcatcattcacaacatttacgtgcacgatattaaggtgacttat
gggggcatggtcagagactccgtggaccacgtcgggttcaggacggtggccgatggagac
ggggtttcgctcttcggggcttccaatgtttgggttgatcatctgtccatgcacaggtgc
gccgacgggatcgttgatgttatcgagggttcaactgccgtcaccatttcgaattgccac
tggactgatcatgacaaggtcttgctattcggtgcccgcgataacaacatccaggatgac
tccatgcgtattacggttgcatacaaccattttggaaaaaggctagttcaaagaatgccg
agagtccgatcaggaatcgtccatgtcgtgaacaacgactacacccactgggagatgtat
gccatcggcggaagcaaccatgctactctcattagccagggcaaccggttcattgcccca
gacagacctgaattcaaacaggttacgcatagggatgcccccgagtttgagtggaggaaa
tggacatggagatcgcagggagatctgttcgtaaacggcgccttcttcgttcaatctgga
gatcctaatgggcctaaaagactgggaacccttgaccacgtccaagcgaagcctggggca
atggtcaagagactgacccaatttgctggtgtcctcggcggttgcagacccggcgttgcc
tgttaa
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