KEGG   Rhododendron vialii: 131336696
Entry
131336696         CDS       T09330                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131336696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131336696
Spliceosome [BR:rvl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131336696
 Complex B
    131336696
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 131336696
NCBI-ProteinID: XP_058228603
LinkDB
Position
8a:12858004..12868780
AA seq 594 aa
MAAPTTTAIQSLRLGWCSVYSSTRSKIDSLAYEEFQRYSPSDKHSREYERESSKSREKER
EKGRDKERDRDRDRDRGRDMDMDKDKERHRERDRTRDRDRDWDRDRTRERDRDEGRDRHR
HRDRDRDRDRYSERSERRGRGRDRDDDDHHRSRDYERPKEYEGDREDRHRQRSKSRSSGR
SERRSRSRSKSKRISGFDMAPPVSAILASAAVAAVGGQISGTTPPVMFPNMFPLPTSQQF
GALPIMPVQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMSAIGGNTAGPGDAVVN
VYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPN
LNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRETGNS
KGYAFCVYQELAVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQENVLLHAQQQIAL
QRLMLQPAALATKVVCLTQAVNVDELIDDEVYEDIIEDMRVECGKFGTLEKVVIPRPNPN
GEPTPGLGKVFLEYVDIDGATKARQGLNGRKFDGNQVVAVFYPENKFAEADYDG
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggcggcaccgacgactacagcgattcaaagtctcaggttaggttggtgttcagtgtac
tcgagtacaagatctaaaatagacagccttgcctatgaggaatttcaaaggtattctccc
tcagataaacactctcgggaatatgaaagagagtcttcaaagagcagggagaaggaaagg
gaaaaagggcgtgataaggaaagagaccgggatagggatagggacagaggaagggatatg
gacatggacaaggacaaggagagacatagagaaagggacaggactcgggatagggatagg
gattgggatagggacaggactcgggaaagggatagggatgaaggtcgtgaccgtcaccgt
caccgtgaccgagacagagaccgagaccgctacagtgaacggagtgagagacgaggaagg
ggcagggatagggatgatgatgaccaccaccggagtcgagactatgagaggcccaaagag
tatgagggggacagagaggacagacacagacaaaggtctaaatctcgctccagcggtaga
tcagagcgcagatcaagatcgcgttcaaaaagcaaaaggataagtggtttcgacatggca
cctccagtttctgcaatattagctagtgctgcagttgcagctgttggaggtcaaatctcg
gggaccacccccccagtaatgtttccaaacatgttccctttgccaactagtcagcaattt
ggagctcttcctattatgccagtccaggcaatgactcagcaggctactagacatgctcgg
cgggtgtacgttggtgggcttcctccgagtgcaaatgaacagtctgtggcgacctttttc
agccatgttatgtcggcaattggaggaaacactgctggtccaggagatgctgttgttaac
gtttatataaaccacgaaaagaagtttgcttttgtggagatgagatccgtagaggaagcc
agcaatgccatggccttggatggcattatttttgagggagcaccagttaaagtgaggaga
cctagtgattataacccctcactggctgctacactggggccgagccaacctaatccaaat
ctgaacctagctgctgttgggctaacaccaggatctgcaggtgggcttgagggtcctgac
agaatttttgtgggtgggcttccttattacttcactgaagtacagatcagggagctcctt
gaatcttttgggccccttcggggtttcgatcttgtgaaggacagagaaactggaaactcg
aaaggctatgcattctgtgtttaccaggagctcgcggttacagatattgcttgtgcggca
ctgaatggaataaaaatgggtgataaaactcttactgttaggcgtgctaaccagggcact
acccaacctaaacctgaacaagagaatgtactgttgcatgcccaacaacaaatagcatta
cagaggctcatgttacaacctgctgcattggctactaaggttgtgtgcttaactcaagcg
gtcaatgtggatgagctcatagatgatgaagtttatgaagacataatagaggacatgaga
gtagaatgcggaaaatttggtaccttggagaaagtggtcattccgcgcccgaatcccaat
ggtgaaccaactccagggcttgggaaggtgttcttggagtacgtagacattgatggtgcc
accaaagctcgccaagggttgaacggaaggaagttcgacgggaatcaagttgtggctgtt
ttttatccggagaacaaattcgctgaggcagattatgatggctag

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