Ralstonia wenshanensis: KOL96_01080
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Entry
KOL96_01080 CDS
T08691
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rwe
Ralstonia wenshanensis
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rwe03009
]
KOL96_01080 (dbpA)
Enzymes [BR:
rwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KOL96_01080 (dbpA)
Ribosome biogenesis [BR:
rwe03009
]
Prokaryotic type
rRNA helicases
KOL96_01080 (dbpA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
YjeF_N
CMS1
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UGS88873
LinkDB
All DBs
Position
p56D2:246513..247910
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AA seq
465 aa
AA seq
DB search
MTIEPTATPFTNLALAPAVLANLAQLGYTDMTPIQAASLPIALAGHDLIAQAKTGSGKTA
AFALALLARLDARNFDVQAMVLCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQ
AASLEHGAHVIVGTPGRIMDHLERGNLALGALKTLVLDEADRMLDMGFFDDIATVVRQCP
PDRQTLLFSATYPEGIAKLSQRILRNPKEVKLEERHDDSKIRQRFYEVTDSQRLHAVGLL
LKHYRPVSTLAFCNTKQQCRDLLDVLRAQGIHALALHGELEQRERDQVLIQFANRSCSVL
VATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADENGWALSLASMDEMGRVGN
IEEAMGREVEWHKLDELDTGNDAPLLPPMETLQILGGRKEKIRPGDVLGALTGDAGFRGD
QIGKINVTEFSTYVAVERGIAREALRKLNAGTVKGKKVRVRLMEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaaccaaccgccacgcccttcaccaacctagcgctcgccccggccgtgctc
gcgaaccttgcgcagctcggctacaccgacatgacgccgatccaggctgcaagcctgccc
atcgcgcttgcggggcacgacctgatcgcgcaggcaaagacgggcagcggcaaaaccgca
gcgtttgcgctggccctgctcgcacggctggatgcgcgcaacttcgacgtgcaggcgatg
gtgctctgccccacgcgcgaacttgccgaccaggttgcgcaggaggtgcgccgcctggcc
cgtgccgaagagaatgtgaaggtgctcacgctctgcggcggcacgccgatgcgcccgcag
gcagccagcctcgagcatggcgcccacgttatcgtcggcacgcccggccgcatcatggac
catctggagcgcggcaatctcgcgctcggcgcactgaagacgctcgtgctggacgaagcc
gaccgcatgctcgacatgggtttcttcgatgacatcgcgacggtcgtgcgccagtgtccg
cctgatcgtcagacgctgctgttctcggcaacgtacccggaagggattgcgaagctgagc
cagcggattctgcgcaacccgaaggaagtgaagctcgaagagcgccacgacgacagcaag
attcgccagcgcttttacgaggtgaccgacagccagcggctgcatgcggtcgggctgctg
ctcaagcactatcggcctgtcagcacgctcgcgttctgcaacacgaagcagcaatgccgc
gacctgctcgacgtgttgcgcgcgcagggcattcacgcactggcgctgcacggcgaactc
gaacaacgcgagcgcgatcaggtgttgatccagttcgcgaaccgcagttgctcggtgctg
gtggcgaccgacgttgccgcgcgcgggctcgatatcgcccaactggaagcggtgatcaac
gttgacgtgacgcccgatcccgaagtgcatgtgcaccgcattggccgcacgggccgcgcc
gatgagaacggctgggcgttgagcctcgcgagcatggacgagatggggcgcgtcggcaat
atcgaagaggcgatgggccgcgaggtcgaatggcacaagctcgacgagctggataccggc
aacgatgcaccgctgctgccgcccatggaaacgctgcagattctcggcggacgcaaggag
aagatccgccccggcgatgtgctcggcgcgttgacgggcgatgccggctttcgcggcgac
cagatcggcaagatcaacgtgaccgaattctcgacctacgtcgcagtcgagcgcggcatc
gcgcgcgaggcgctgcgcaagctcaatgccgggacggtgaagggaaagaaggtcagggtt
cggctgatggaagagtga
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