Ralstonia wenshanensis: KOL96_04710
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Entry
KOL96_04710 CDS
T08691
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe02020
Two-component system
rwe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KOL96_04710
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KOL96_04710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rwe03021
]
KOL96_04710
Transcription machinery [BR:
rwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KOL96_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF7344
HTH_IclR
Csm2_III-A
Motif
Other DBs
NCBI-ProteinID:
UGS88086
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All DBs
Position
p56D2:complement(1089582..1091084)
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AA seq
500 aa
AA seq
DB search
MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALASNPFLEEVEQEAGAQPD
AARTGDIAIAPDLDGAAADHTPVDDAPLETTTSAIETDATLAASEDFPTDFSTYYSHGGA
HHGDGEDSDIGEWVHSTPSLREHLHQELRSYRLSERDCLLAQTLIEALDDDGYLRQLLSE
LIPLAPVEPPPTEKEMQIALALVQSLDPPGVAARDLAECLRLQIEARPADTEAEERIQEI
AQDIVRSHLPRLAKREFTQMRRALACTEEELRDACALIRMLDPRPGLRFSQAHAGYIVPD
VIVTKIKGKWVALTNPAVAPCARVNKVYAELFAQTRGHNRTPLAHQLQEARWLIRNAQQR
FATIQRVAEAIVAHQKHFLEYGEVAMKPLVLRDVAEELGLHESTISRATGNKYMATPRGI
FEFKYFFSRQLATDTGGACSAASVRALLKEMIEAEDSDAPLSDVSLAKMLAEQGVIVARR
TVAKYRGLMRIAPAEMRRQV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggccgctctggaaatgcgtgcgaagcagcatctcgcgctcacgccgcgactg
cagcaatccgtcaagctgctgcagttgtctgcaaccgaatttgcgcaggaaatgcaagaa
gcgctcgcaagcaatccgttcctggaagaggtcgagcaagaagcgggggcgcagcccgat
gcggcacgcaccggcgacattgccattgcgcccgatctcgacggcgccgcggctgaccac
acgcctgtagacgatgccccgctggaaaccaccaccagcgccattgaaaccgacgcgacg
ctggccgcatcggaagatttcccgaccgacttcagcacctactacagccacggcggcgcc
caccatggcgacggtgaagacagcgacatcggcgaatgggtccactccacgccgagcttg
cgcgagcacctgcatcaggagttgcgcagctatcgcctgtctgagcgcgactgcctcctc
gcacagacgctgattgaagcgctggacgacgacggttacctgcgccagttgctctccgag
ctgattccgctcgcaccggtggaaccgccacccaccgagaaggagatgcagattgcgctg
gcgctcgtgcagagcctggacccgccgggcgtggctgcgcgtgatctggcggaatgcctg
cgcctgcagatcgaagcccgccccgccgacaccgaagccgaagaacgcatccaggagatc
gcgcaagacatcgtgcgcagccacctgccccgattggccaagcgcgaattcacgcagatg
cgtcgcgcgctcgcttgcaccgaagaggagttgcgcgacgcctgcgcactgatccgcatg
ctggacccgcgccctgggctgcgcttttcgcaggcccatgcgggctacatcgtgccggac
gtgatcgtcaccaagatcaagggcaagtgggttgccctgacgaacccggcggtggcgccg
tgcgcgcgcgtcaacaaggtctacgcagagctgtttgctcagacacggggccacaatcgc
acgccgctggcgcaccaactgcaggaagcacgctggctgatccgcaatgcgcaacaacgc
tttgccacgatccagcgcgtggccgaggcgatcgtcgcgcaccagaagcacttcctggaa
tacggggaggtggccatgaagccgctggtgctgcgtgacgtggctgaagagctgggactg
cacgaatcgaccatctcgcgcgccacgggcaacaagtacatggccacgccgcgcggcatc
ttcgagttcaagtacttcttctcgcgccaactggccaccgacaccggcggcgcatgctcg
gccgcttcggtgcgggcattgctcaaggagatgatcgaagccgaagattcggacgcgccg
ctctccgatgtatcgctcgccaagatgctggccgagcagggcgtgatcgttgcgcgccgc
accgtggccaagtatcgcgggctgatgcgcattgcgccggccgaaatgcggcgccaggtc
tga
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