Ralstonia wenshanensis: KOL96_09500
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Entry
KOL96_09500 CDS
T08691
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe02020
Two-component system
rwe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KOL96_09500
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KOL96_09500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rwe03021
]
KOL96_09500
Transcription machinery [BR:
rwe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KOL96_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
DUF2344
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UGS91348
LinkDB
All DBs
Position
complement(334501..336009)
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AA seq
502 aa
AA seq
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MKQSLQLRLSQHLALTPQLQQSIRLLQLSTIELQQEVEQALTENPLLERENEWLDTSARI
GADGSVNALQSNSATPLPTESPPPAPNGGDSSDTPDSYENSHDNGADFDSDYGSDRSDWS
LDDFARKPQSDEDDRAPLQLREAEQSLREFLMEQLAPLKLSMRDKGLVIFLIESLDDEGY
LAGTLDEILADLPAELEVELDELQAALRMLQSFDPPGIGARSAAECLSLQLHRLDSPAKA
LALIIVNQHLELLAARDYTRLKKALSVDEPALKAAHELIRSLAPFPGHAFGRAEADFVVP
DVIVRKTSAGWMAQLNPDVMPRLRINDMYAQILRSSRGESGAANLQQKLQEARWLIKNIQ
QRFDTILRVSQAIVERQKSFFTHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPM
GTFELKYFFGSHVSTETGGAASSTAIRALIKQLVGAEDPKNPLSDSRIAELLGEQGFVVA
RRTVAKYREALKIPAVNLRKSL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgctccagctccgtctctcccagcatctcgcgctcacgccgcagttgcag
caatcgatccgattgctgcagttgtcgaccatagaactgcagcaagaagttgagcaggcc
ctgactgaaaacccgctgctggagcgggaaaacgagtggctcgacacctccgcacgcatc
ggcgcggacggatcagtgaacgcgttgcaaagcaacagcgccacgcccctgcccaccgaa
tcgcctccgcccgcacccaacggtggcgacagcagcgacacccccgacagctacgagaac
agtcacgacaacggcgccgatttcgacagcgattacggttccgaccgctccgactggagc
cttgacgacttcgcccgcaaaccgcaatccgacgaagacgaccgcgccccgctgcaattg
cgcgaggccgaacaaagcctgcgcgaattcctcatggaacagctcgcaccgctcaagctg
tcgatgcgcgacaagggcctcgtcattttcctgatcgagtcgctcgacgacgaaggctat
ctggcaggcacactcgacgaaatcctcgcggatctgcctgccgaactcgaagtcgaactc
gacgaactgcaagccgcgctacgcatgctgcagagttttgatccgcctggcattggcgca
cgctcagccgccgagtgcctgtcactgcaattgcaccggctcgattcgcccgcgaaggcg
ctggcgctcatcatcgtcaatcagcatctcgaactgctggctgcgcgtgactacacgcgc
ctgaagaaggcactgtccgtcgacgaacccgcactgaaagcagcgcatgagctgatccgt
tcactggcaccgttcccgggtcatgcgttcggtcgcgccgaggcggatttcgtagtgcct
gacgtgatcgtgcgcaagacgagcgcaggctggatggcgcaactgaatcccgatgtgatg
ccccgcctgcgcatcaacgacatgtacgcgcagatcctgcgcagcagccgcggtgaatcg
ggcgccgccaatctacagcagaagctgcaggaagcacgttggctgatcaagaacatccag
cagcgcttcgatacgatcctgcgtgtctcgcaggccattgtcgagcgtcaaaagagcttc
ttcacgcacggtgaaatcgccatgcgccccttggttttgcgggaaatagccgatacactg
ggtctacacgagtccacgatctcccgtgtgacaaccaacaaatacatggcgaccccgatg
gggacgttcgagttgaagtacttcttcggcagccatgtatcgacggaaaccggcggggct
gcgtcatccactgcgatacgcgcgctcatcaagcaacttgtaggagccgaagacccgaag
aatcctctgtccgatagcagaattgccgagctgttaggcgaacaaggattcgtggtggcc
cgtcggacggtggccaaataccgcgaagccctcaagatccctgcagtgaatttgcgcaag
tctttatag
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