Ralstonia wenshanensis: KOL96_10190
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Entry
KOL96_10190 CDS
T08691
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KOL96_10190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rwe03019
]
KOL96_10190
Enzymes [BR:
rwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KOL96_10190
Messenger RNA biogenesis [BR:
rwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KOL96_10190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
UGS91479
LinkDB
All DBs
Position
487673..489343
Genome browser
AA seq
556 aa
AA seq
DB search
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL
HRLSASQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
ILPPKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQAARTRALSEFKAGT
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
LLRDIERLIKRELPRTVLEGFEPDPTIAAEPIPNGRNSAGRGGNARGGRPGGGRSQQPRQ
ASGNAAPREPRAPREPREPRRESSGNSQGQGQGQNQGQGQGRNGAGSRQRQAQGQQGQRD
GQAAPKPRNGQSQARGQRQGNGQGQGQGGGQGGQGGQQRRASNTQAAQPAHKGQPAKQPF
NGLFAKAAALLGGRKA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttccgaactcggcttgtcagacaagctggtacgcgccgtggccgaactcggc
tacgcagaacccactccgattcaacgccaggccatccccgcgatcctcaagggcggtgac
ctgctcgccggtgcacagaccggcaccggcaagaccgccggtttcacgctgccgctgctg
caccgcctgtctgcctcgcaaccgaacaaagtgcagacgccgcagggcatgcgctttccg
atccgcgcgctggtgctgacgcccacgcgtgagcttgccgcgcaggttgaagaaagcgtg
cgcgcctatggcaaatacctgccgctgaagtcgatggtgatgttcggcggcgtcggcatc
aacccgcagatcgatgcgctcaagcgcggtgtcgatatcgtcgtggccacgccgggccgc
ctgctggaccacgtcggccagcgcaccatcgatctgtcgcacattgaactgctggtgctg
gacgaagccgatcgcatgctcgacatgggcttcatccacgacatccgcaagatcctcaac
atcctgccgcccaagcgccagaacctgctgttctcggccacgttctccgacgacatccgc
gaattggccgatcgcctgctcgacaagccggcgctgatcgaagtcgcgcgccgcaacacg
acagccgaaacagtcgaacaacgcatctacccggtcgaccgcgagcgcaagcgcgaattg
ctggccaagcttgtgcgcgacaacgactggcaccaggtgctcgtcttcacgcgcaccaag
cacggcgccaaccgcctggccgagcagctcacgcgcgacggcattccggcgctggcgatc
cacggcaacaagagccaggcggcacgcacgcgtgcgctgtcggagttcaaggccgggacg
ctgcgcgtgctggttgccaccgatatcgccgcgcgcggtatcgacatcgaccaactgccg
cacgtggtgaacttcgacttgccgaacgtgcccgaggactacgtacaccgtatcggccgc
accggacgcgcgggtgcacaaggcgaggcgatctcgctggtctgcgtggacgagcatggc
ttgctgcgcgacatcgagcgcctcatcaagcgcgaactgccgcgtaccgtgctggaaggt
ttcgagccggacccgaccatcgcagcggagccgattccgaacgggcgcaactcggcaggc
cgtggcggcaacgcgcgcggtggccgccccggcggtgggcgcagccagcagcctcgccag
gccagcggcaacgctgcgccacgcgagccgcgggctccgcgtgagcctcgcgaaccgcgt
cgcgagtcgagcggtaacagccagggccagggccagggccagaatcaaggccaaggccag
ggtcgcaatggtgccggcagccgccagcgtcaggcgcaaggtcagcaaggtcaacgtgac
ggccaagctgcgccgaagccgcgcaatggtcaatcgcaagcacgcggccaacgtcagggc
aatggccaaggccaaggccagggcggtgggcaaggcgggcagggtggacaacaacgccgg
gcatcgaacacgcaagccgcgcagccagcccacaagggacagccggccaagcagccgttc
aacggtttgtttgccaaggcggctgcgttgctcggcggccgtaaagcctga
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