Ralstonia wenshanensis: KOL96_12840
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Entry
KOL96_12840 CDS
T08691
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe03410
Base excision repair
rwe03430
Mismatch repair
rwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KOL96_12840 (recJ)
03430 Mismatch repair
KOL96_12840 (recJ)
03440 Homologous recombination
KOL96_12840 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rwe03400
]
KOL96_12840 (recJ)
DNA repair and recombination proteins [BR:
rwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KOL96_12840 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KOL96_12840 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KOL96_12840 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
UGS91963
LinkDB
All DBs
Position
complement(1059169..1060863)
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AA seq
564 aa
AA seq
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MTRIAVRSHSADAATTLAGHGIHPVLARILAARGVARPDELSTELTDLLPPAQLKGIDDA
AHYLADAIAANKRLLIIADYDCDGATACAVGVRGLRMLGAQASYIVPNRFEYGYGLSPEI
VALAAREKPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKNLAGVGVMFYVLLALRAELRKRGVFTPQDQPRLDTLLDLVALGTVADVVKLDAN
NRLLVAQGLKRMRAGRMCPGIAALFRVAGREARRASTFDLGFGLGPRLNAAGRLADMALG
IECLLTDDYDRAMAIAAELDGMNRERREIEAGMQQEALAILDSMNALDGAGRHTIAVYNE
TWHQGVIGIVASRIKDKFHRPVFTFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRSPGLI
VKFGGHAMAAGLTLREDGFDAFVTTFEAVGREWLTEALLSRVLETDGEADPECFTPQFVE
LLETQVWGQGFPAPSFCGEFDVLSQAVLKDKHLKLKLGRGKQHFDAIWFNHAEPLGASAY
VAYRLDNNTFNGITRVQMVIEHAQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgctgtccgttcgcattccgcagacgccgccaccacgctggccggccac
ggcatccatcccgtcctcgcacgcatcctggccgcccggggcgtcgcccggcccgacgaa
ctatcgaccgagctgaccgacctcctgccccccgcgcaactcaagggcattgacgacgca
gcccactacctggccgacgccatcgccgccaacaagcgcctgctgatcattgccgactac
gactgcgacggtgccaccgcctgcgccgtgggcgtgcgtggcttgcgcatgctgggcgcg
caggccagctatatcgtcccaaaccgcttcgagtatggctacggcctgtcgcccgaaatc
gtggcgctcgctgcgcgcgagaagcccgacgtgctggtcaccgtcgacaacggcatcgcc
gacgtggcgggcgtggcggccgccaacgcgctgggcatcgacgttgtcgtgacggaccat
cacatgcccggggcgcagttgcccgaggcgcgcgtgatcgtcaacccgaaccagccgggc
tgcggcttcccgagcaagaatctggccggcgtgggcgtgatgttctacgtgctgctggcg
ctgcgggcggagctgcgcaagcgcggcgtgttcacgccgcaagatcagccgcgccttgac
acgctgctcgatctggtggcactcggcaccgtggccgacgtggtcaaactcgacgccaac
aatcgtctgctggtcgcgcagggtctcaagcgcatgcgtgcggggcggatgtgcccgggc
atcgccgcgctgttccgcgtggccggccgcgaggcgcgccgcgcgtcgacgttcgatctc
ggcttcggccttggcccgcgcctgaacgccgccgggcggctggccgacatggcgctcggc
atcgaatgcctgctcaccgacgactacgaccgcgccatggccatcgccgccgaacttgac
ggcatgaaccgcgagcgccgcgagatcgaagccggcatgcagcaggaagccctcgccatc
ctcgacagcatgaacgccctcgatggcgccggccggcacaccatcgcggtctacaacgaa
acgtggcaccagggcgtgatcggcatcgtcgcctcgcgtatcaaggacaaattccaccgc
ccggtcttcaccttcgcacccggcgacgacggcgtcatcaagggctcgggccgctcgatt
cccggcttccacctgcgcgatgcgctggacgccgtccacaagcgcagcccgggactgatc
gtgaagttcggcggccatgccatggcggctggactcacgctgcgcgaagacggtttcgat
gcattcgtcaccacgttcgaggccgtcggccgcgagtggctgaccgaggcgctgctctca
cgcgtgctcgaaaccgatggcgaggcggaccccgaatgcttcacaccgcagttcgtcgag
ctgctcgaaacccaggtctggggtcagggctttccggcaccaagcttctgcggcgagttc
gatgtgctgtcgcaggccgtactgaaagacaagcacctgaagctcaagctcggccgcggc
aagcagcatttcgacgcgatctggttcaaccacgccgagccgcttggcgcctcggcgtat
gtggcctaccggctcgacaacaacaccttcaacggcatcacgcgcgttcagatggtgatc
gagcatgcgcaatag
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