Ralstonia wenshanensis: KOL96_13220
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Entry
KOL96_13220 CDS
T08691
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rwe
Ralstonia wenshanensis
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rwe03400
]
KOL96_13220
Enzymes [BR:
rwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KOL96_13220
DNA repair and recombination proteins [BR:
rwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KOL96_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UGS92035
LinkDB
All DBs
Position
1138376..1141219
Genome browser
AA seq
947 aa
AA seq
DB search
MQTLAFAPGPAFLSHAADAAWRFLDVHAQSSRAATVVVPTAAQIPGVRSALHASAQAAGT
PRLLPRILTLGHWLLDLPPEAGVPVARTPLSRLLAVQQALKTQAWLREALGAQDDAALWG
VAQVLVTVSDELSQRWLTLDAAHSGADGRSDELESALAEALERTYAQLSERFLGTESRIV
LTFWRLLSGAADPIPMRLRAMRRLLDELDGPIVWMSPTDPEAVDLDFLQRAAERVPVLNI
GYDWNAPETGASAAPATHADFRDLLLHAWPECATPAQAADNAGDAQIPTPILRIAGAARF
EDEAAFAAHTLVDWLNAGRRSLALVAQDRIVARRVRALLARVNVPVRDETGWKLSTTRAA
AALMRWVDVVQGDGDTAALLDLIKSPFCLRDADAGVATPAWVAELERRVRRHNVSGGWGR
LRRLVADRSTNEADGEAKVSRLADRLGVLADEAALWRRAGSATLDAWVTLLAGTLDRLHM
RTGLQNDDAGRQLLDWIGRLRTSIHGSTDAGARFSLTEWRALLSMLLESAVFSEPSPPAD
RRVVILPLNGARMRRFDGVVVVGCDDAQLPSAQPEWLFFSNDVRRELGLPDRAQRFAQQA
RDLAEVLLNQPEVVLTWQRHGGRGEPHRLSGWLERLQRRLAVSGVRIDTSVTLPSLQTTS
QPTDMPAPAAPSLVPSTLSAAAYNSLRRCPYQFFVGRMLRLGELEEVSDELEKRDIGEIL
HAILHRFHRQLLEVPMHDPADRQGLLLSITDELFGPLLAEDGNALRFYRRWLGVMSSYLA
WQAAREADGWRFEAGEVDADTSITLPDERPLRLRGRIDRIDVHAEHGVAVLDYKTQSQMV
LVRRAKSPFEDCQLPFYGVLDARADSGGWVSLDGEARGDKRDVALPDFTQVVDWLIEQMQ
KDMTALAAGAPLPAFGDESACRYCAARGLCRKGYWTDGAPREPEGTA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgcttgccttcgcgcctggcccagcattcctttcccatgccgccgacgctgca
tggcgctttctggatgtgcatgcccaatcctcgcgtgccgccacggttgttgtgccgaca
gccgcgcagattcctggggtgcgcagtgccctgcacgccagtgcgcaagcagccggcacg
ccgcgcttgctccctcgcattctgacgctggggcactggctgctcgatttgccacccgaa
gcgggtgtgccggttgcgcgcacgccgctgtcgcgactgctcgccgtgcagcaggccctc
aagacgcaggcatggctgcgtgaagcgcttggcgcacaggacgatgccgccctttggggc
gtggcgcaggtgcttgtgacggtgtcggatgagttgtcgcaacgttggctgacgctggat
gccgcgcacagtggcgccgatgggcgttccgacgagctggagtcggcattggcggaggcg
ttggagcgtacctacgcacaattgtccgagcgtttcctcggtaccgaatcgcgcatcgtg
ctgacgttctggcggttgctttcgggcgcggcggacccgattccaatgcgcctgcgggcc
atgcggcgcctgctggacgaactggacgggccgatcgtgtggatgagcccgaccgatccc
gaggcagttgatctggatttcctgcagcgcgccgccgagcgcgtgcctgtgctcaacatc
ggctatgactggaatgcccctgaaaccggcgcgtctgcggcgcccgccacacacgcggat
ttccgcgatctgctgctgcatgcctggcccgaatgcgccacgcccgcccaggcggcggac
aatgctggcgacgcgcagattccgacgccaatcctgcgcattgcgggtgccgcccgcttt
gaggacgaggcggccttcgccgcgcatacgctggtcgactggttgaacgccggacgccgc
tcgctggcgttggtggcgcaggatcgcatcgtcgcgcggcgggttcgcgcgctgctcgcg
cgtgtgaacgtgcccgtgcgcgatgagaccggctggaagctctccacgacgcgcgctgct
gcggcactgatgcgctgggttgatgtggtgcagggcgatggcgatactgctgcgctgctt
gatctcatcaaaagtccgttctgtttgcgcgatgccgacgcaggtgttgccacgcccgca
tgggttgcggaactggagcgtcgcgtgcgccggcataacgtttcgggtggctgggggcgg
ttgcgccgactggtggccgatcgctccaccaatgaagctgatggcgaagcaaaggtcagc
cgcctggccgatcgcctcggcgtgctggctgatgaggcggccctgtggcgccgtgccggc
agcgccacgctcgacgcatgggtaacgctgctggcaggcacgctcgatcgtctgcatatg
cgcaccggtttgcagaacgacgatgcaggccgccagttgctggactggattggccgcctg
cggacttccatacatggcagcaccgatgcgggcgcgcggttctcgctcaccgagtggcgt
gcgttgctgtcgatgctgctcgaatctgcggtcttcagcgagccttcaccccctgcggat
cgacgtgttgtcatcctgccgctgaacggcgcgcgcatgcggcgcttcgatggcgtcgtg
gtggtgggttgtgacgatgcgcagttgccgtcggcgcagccggagtggctgttcttctcc
aacgacgtgcgacgcgaactcggtttgcccgaccgggcccagcgctttgcgcagcaggcg
cgcgacctggccgaagtgctgctcaaccagcccgaggtggtgttgacctggcaacgccat
ggcggacgcggcgagccgcatcgcctttcgggatggctcgaacgcttgcagcgccggttg
gcggtgagcggcgttcggatcgatacgtcggtcacgttgcccagtctgcagaccacgagc
cagcccaccgacatgcccgcgcccgccgctccgtctctggtgccgtccacgctgagtgcg
gccgcttacaacagcctgcgccgttgcccataccagtttttcgtcggtcgcatgcttcgt
ctgggcgagctggaagaggtgtccgacgagctggagaagcgcgacattggcgagatcctg
catgcgatcctgcatcgttttcaccggcagttgctggaagtgccaatgcacgatccggcg
gatcgtcagggcttgctgctaagcatcaccgatgaactgttcggcccgctgttggccgag
gatggcaacgcgctgcgtttctatcggcgctggctcggggtgatgtcgtcgtacttggcg
tggcaggccgcgcgcgaggctgacggctggcgctttgaggcgggcgaggtcgatgccgat
acgtccatcacgttgccggacgagcgcccgctgcgcttgcgcggccgaatcgaccgcatc
gacgtgcacgccgaacacggcgtggcggtgctcgattacaagacgcaatcgcaaatggtg
ctggtgcgtcgcgccaagtcgccgtttgaggattgccagctgccgttttacggcgtgctc
gatgcgcgcgcagactccggcggctgggtttcgttggacggcgaggcacgcggggacaag
cgcgacgttgcattgcccgactttacgcaagtcgtcgactggttgatcgaacagatgcaa
aaggacatgacggcccttgcagccggtgcgccgctgccggccttcggtgatgaatcggcg
tgccgctactgcgcggcgcgtggcctgtgccgcaaggggtattggacagacggcgcaccg
cgtgagccggagggcacggcatga
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