Ralstonia wenshanensis: KOL96_20850
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Entry
KOL96_20850 CDS
T08691
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KOL96_20850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rwe02022
]
KOL96_20850
02035 Bacterial motility proteins [BR:
rwe02035
]
KOL96_20850
Two-component system [BR:
rwe02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KOL96_20850
Bacterial motility proteins [BR:
rwe02035
]
Pilus system
Twitching motility proteins
KOL96_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
FleQ
HTH_50
HTH_28
AAA_16
Peptidase_C15
AAA_19
Myosin_head
DUF2617
Motif
Other DBs
NCBI-ProteinID:
UGS90385
LinkDB
All DBs
Position
complement(2740230..2741852)
Genome browser
AA seq
540 aa
AA seq
DB search
MSKAAIVREPILVVDDEADLRELLEISLRRMGHDVVLASGLAEAREALSRQRFALVLTDM
RLGDGLGIELVRQLSATADRTPVAVITAYGSAENAVEALKAGAFDYIAKPLSLDQLRSLV
LNALGRQQRDPDPGNADLVERTNDLLPGHSAAMQEVRRSLMRLARSMAPVVISGESGSGK
ERAARAVHALSARASRPFVAVNCGAIPENLMEAEFFGYVKGAFTGADTDRQGFFQAANGG
TLMLDEVADLPLTMQVKLLRALQERRVRKIGESREDPVDVRVVCASHQNLARLVAAGRFR
EDLFYRLNVLELRMPTLRERAEDVPVLAGVLLEQLASRYGDPRPKRLTRPALQQLCAYPF
PGNVRELENLLERAYAFAEGESIDVDDLGALGAEIERSPLFHRTREAQAAAAAHHPMSPP
MTSWPDAVYMPAAVPSPMGMPQPVAQPEPAPVAQPAEPSLPSVALPIDLPAYLESVERNV
ILAALDQTGFNRTAAAKLLGLSFRQLRYRMQQLGIRDPRDVEASPGSVGEAAGNGLNGDA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccgccatcgttcgcgaacccatcctcgtcgtcgatgacgaagccgacctg
cgcgagctgctggaaatttccctgcgccgcatggggcacgacgtcgtgcttgccagcgga
ctggccgaggcgcgcgaggcgctctcccgccagcgctttgcgcttgtgctgacagacatg
cgcctgggtgatggcctgggcattgaactcgtgcgccagctttctgccacggccgaccgc
acgccggtggccgtcatcactgcttatggcagcgccgagaatgcggtggaagcgctcaag
gccggtgcgttcgattacatcgccaaaccgctctcgctggaccagttgcgcagcctcgtg
ctcaacgcgctgggccgccagcaacgcgatcccgatcccggtaatgccgacttggtggag
cgcaccaacgacctgctgccgggccattccgccgcgatgcaggaagtgcgccgctcgctg
atgcgcctggcgcgcagcatggcgccggtggtgatcagcggcgaatccggcagcggcaag
gagcgtgcggcgcgcgcggtgcatgcgctgtctgcgcgtgcatcgcggccgttcgtggcg
gtcaactgcggcgcgattcccgagaacctgatggaagccgagtttttcggctacgtgaaa
ggcgcttttaccggcgccgacaccgaccggcagggtttcttccaggcggccaatggcggc
acgctcatgctcgatgaggtggccgacctgccgctcacgatgcaggtgaaattgctgcgt
gcgttgcaggagcgccgcgtgcgcaagatcggcgaaagccgcgaagaccccgtcgacgtg
cgtgtcgtgtgcgccagccaccagaaccttgcgcgtctggtggctgccggccgcttccgc
gaagatttgttctaccgcctgaacgtgctggaactgcgcatgcccacgctgcgcgagcgc
gccgaagacgtgcccgtgctggccggcgtgctgctcgagcagcttgccagccgctacggc
gatccgcgccccaagcgcctgacgcgtccggcgctgcagcaactgtgcgcgtatccgttt
ccgggcaacgtgcgcgagctggagaacctgctggagcgcgcctacgcctttgcggaaggc
gagtcgatcgacgtggatgaccttggcgcactcggcgccgagatcgagcgctcgccgctg
ttccaccgcacgcgcgaggcgcaggccgccgcagcggcccatcacccgatgtcgccgccg
atgacaagctggcctgatgccgtctacatgccggcggccgtgccaagtcccatggggatg
ccgcaaccagtggcgcagcctgagccggcccctgtagcgcagccggcggagccgtcgctg
ccgagcgttgcattgccgatcgatctgccggcctatctggagtcggtcgagcgcaacgtc
atcctggccgccctggaccagacgggcttcaaccgcacggcggccgccaagctgctcgga
ttgtcattccgccagttgcgctatcgcatgcagcagcttggcattcgtgacccgcgtgac
gtggaagcgtcgccgggcagcgtgggcgaggcggccggaaatgggctgaacggcgatgcc
tga
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