Ralstonia wenshanensis: KOL96_21980
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Entry
KOL96_21980 CDS
T08691
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rwe
Ralstonia wenshanensis
Pathway
rwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KOL96_21980 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rwe03019
]
KOL96_21980 (recQ)
03400 DNA repair and recombination proteins [BR:
rwe03400
]
KOL96_21980 (recQ)
Enzymes [BR:
rwe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KOL96_21980 (recQ)
Messenger RNA biogenesis [BR:
rwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KOL96_21980 (recQ)
DNA repair and recombination proteins [BR:
rwe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KOL96_21980 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UGS90588
LinkDB
All DBs
Position
complement(2964982..2966895)
Genome browser
AA seq
637 aa
AA seq
DB search
MYDSPAIDHALQALPEDTAAATHAVLHDVFGYSAFRGPQAEIVAHVADGGDCLVLMPTGG
GKSLCYQIPALVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLNSALTGAEAAQV
ERDLAAGRLDLVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSV
LHERFPHVPRIALTATADAVTRDEIVERLALTDARVFLSSFDRPNIRYTIVEKDSARQQL
LRFIRAEHMDGDTCDAGIVYCLSRKKVEETAQWLAEQGIRALPYHAGMDSEVRARHQAIF
RKEEGVVMVATIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDGMPANAWMAYGL
SDVVQQRRMIDESDADDVHKRVSTAKLEALLGLCEAASCRRVALLAYFGESSQPCGNCDT
CLTPPQTWDATREAQMALSCAYRVQQASRVSFGAGQLIDILRGNATERVKQWHHETLSTF
GIGSDLSEAAWRGVFRQLVAQGLFAVDHGGHGALILTDAARPVLKGAQSVILRRQVEKVR
GTSSSSAKKERRADPAAELSAEAQVRWQALRAWRTQAAREHSVPAYVIFHDATLARIAET
DPDSREALGELPGIGMAKLDRYGQALLDVLEKCREQA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtacgactcccccgccatagaccacgcgctgcaggcgctgcccgaagacaccgccgcc
gccacgcatgcggtgctgcacgatgtgttcggctacagcgccttccgcggcccgcaggcg
gagatcgtcgcccacgtggcggatggcggcgattgcctcgtgctgatgccgaccggcggt
ggcaaatcgctctgctatcagatcccggcgctcgtacggcaccggcgcgggcagggcgcc
ggtattgtcgtgtcgccgctgatcgcgctgatgcaggatcaggtggccgcgctggaagag
gccggcgtgcgcgccgcatacctcaactctgcgctgacgggcgccgaggcagcgcaggtc
gagcgcgatctggcggcggggcggctggatctcgtctacgtggcgcccgagcggttgatg
acgccgcgcttcctcgagctgcttgagcgatcgcgcattggcctgttcgccatcgacgaa
gcgcactgcgtgtcgcaatgggggcacgatttccggcccgagtacatccagctttccgtg
ctgcacgagcgattcccgcacgtgcctcgcattgcgctcaccgccacggccgatgccgtc
acccgcgacgagatcgttgaacggctggcgttgacggacgcgcgcgtcttcctctccagc
ttcgatcgcccgaacatccgctacaccatcgtcgagaaggacagcgcgcgccagcagctg
ctgcgcttcattcgcgccgaacacatggacggtgacacctgcgacgccggcatcgtctac
tgcctgtcgcgcaagaaggtggaggagaccgcgcagtggctggccgagcagggcatccgc
gcgctgccgtatcacgccgggatggactccgaagtgcgcgcccgccatcaggcgatcttc
cgcaaggaggagggcgtcgtcatggtggcgaccatcgcctttggcatgggcatcgacaag
ccggacgtccgcttcgttgcgcacctcgatttgcccaagagcctcgaaggttattaccag
gaaaccggccgcgcaggccgcgacggcatgcccgccaacgcgtggatggcgtatggcttg
tctgacgtggtgcagcagcgccgcatgatcgatgagtccgacgcggacgatgtgcacaag
cgcgtctcaaccgccaagctcgaagcgctgctcggcctgtgcgaagccgcaagctgccgc
cgtgtggcgctgcttgcgtactttggtgaaagcagccagccgtgcggcaactgcgatacg
tgcctgacgccgccgcaaacctgggacgccacgcgtgaggcgcagatggcgctgtcgtgt
gcgtaccgcgtccagcaagccagccgcgtgagctttggtgccggccagctcatcgacatc
ctgcggggcaacgcgaccgagcgcgtcaagcagtggcatcacgagacgctgtcgaccttc
ggcatcggcagcgatttgtcagaagccgcgtggcgcggcgtgttccgacagttggtcgcg
cagggcttgtttgcggtggatcacggcggccacggcgcactgatcctgaccgacgcggct
cgccccgtgctcaagggcgcgcagtcggtgatcctgcgtcgtcaggtcgagaaggtacgt
ggtacgtcttcgtcgtcggcgaagaaggagcgtcgcgccgatccggccgcggagctttcc
gccgaggcgcaggtgcgctggcaggcgttgcgtgcctggcggacgcaggccgcgcgtgag
cacagtgtgccggcatatgtgatcttccacgacgccacgctcgcgcgcatcgccgagacc
gatccggattcgcgcgaagcgctcggcgagctcccgggcattggcatggccaagctggac
cgctacggccaggcgctgctcgacgtgctggagaaatgccgcgagcaagcctag
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