Rubrobacter xylanophilus: Rxyl_0006
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Entry
Rxyl_0006 CDS
T00368
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rxy
Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rxy03032
]
Rxyl_0006
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_0006
Enzymes [BR:
rxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rxyl_0006
DNA replication proteins [BR:
rxy03032
]
Prokaryotic type
DNA Topoisomerases
Rxyl_0006
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rxyl_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABG02987
UniProt:
Q1B041
LinkDB
All DBs
Position
6385..8943
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AA seq
852 aa
AA seq
DB search
MLDTFSGNIQPHSIEDEIRSSFLSYAMSVIVSRALPDVRDGLKPVHRRVLYAMHDLGLQP
NRPYRKSATVVGEVIGKYHPHGDAAVYDTLVRLAQDFSMRHPLVDGQGNFGSVDGDPAAA
MRYTEARLTRIATEMLRDINADTVNFVPNFDESQREPEVLPARFPNLLVNGADGIAVGMA
TKIPPHNLGEVIDATVALIEDPELDDEGLARYIKGPDFPTGGIVVGTRGIREAIRTGRGS
VRVRAKAHTEQIKGNRTQIVVTELPYQVNKAQLLQKIAELVKDRKISDIADLRDESDRGG
MRIVIELKREAVPKVVLNNLFKHTQMQQSFGVNLVALVDGVPKTLSYKEALRHYIAHQFE
VVTRRTRHELGRARARAHILEGLLIALSNLDEVVETIRRSRNVETARRNLVKRFRLSERQ
AQAILDLRLQRLTALERRKVEQDHRDLVEKIEYLEGVLADESKVYGIIREELLEIKAAYA
DERRTAITAQEGAEFEVEDLIAEEEMVISISHEGYLKSVPIGSFRKQGRGGVGVAGMELK
EGDYIEHLFITTTHHYMLFFTNRGKVYRLKVHQLPRMGRAAKGRHVANLLPLAPGERIAA
VISTRDFDEAEYLLFATRRGMVKKTPFRDYNTPLKNEGIIAIKLAGGDELIAVRHASDED
EVVFVTRDGKGLRFRQGDVRPMGRATAGVKGITLKGDDALLSMDVVSDEAADLFMVTEKG
FGKRTAISEFRPQGRGGQGVIAMKVNGERGKIAGVQVVRPGLHELVIVSNMGTTIRIDSD
SVPRQGRAAQGVRVMNLREGDSVSALAKVVSSRGEPGEPDELALDGITEEEAERSATGSR
PAPAANGGRKRG
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacaccttctcgggcaacatccagccgcactccatagaggacgagatccgctcg
tccttcctctcctacgcgatgagcgtgatcgtctcgcgggcgctgccggacgtgcgggac
ggtctcaagccggtgcaccggcgggtgctctacgcgatgcacgacctggggctgcagccc
aaccgcccctaccgcaagagcgccacggtcgtcggcgaggtgatcggtaagtaccacccg
cacggggacgcggcggtctacgacacgctggtgcgtctggcccaggacttctccatgcgc
caccccctggtggacggccaggggaacttcgggagcgtggacggcgacccggcggcggcc
atgcgctacaccgaggcgcgcctcaccaggatcgccaccgagatgctgcgggacataaac
gccgacacggtcaacttcgtccccaacttcgacgagagccagcgggagccggaggtgctg
cccgcccggttcccgaacctgctcgtcaacggggccgacgggatcgcggtcgggatggcg
accaagatcccgccgcacaacctgggcgaggtgatcgacgccacggtggcgctcatcgag
gatccggagctcgacgacgagggcctggcgcgctacataaagggcccggacttcccgacc
ggtggcatagtggtgggcacccgcggcatacgggaggccatccgcacgggccggggctcg
gtgcgggtgcgggccaaggcacacaccgagcagataaagggcaaccggacccagatagtc
gtcaccgagctgccctaccaggtgaacaaggcgcagctcctgcagaagatcgcggagctt
gtcaaggaccggaagatctccgacatcgccgacctgcgggacgagtccgaccgcggcggg
atgcggatcgtgatcgagctcaagagagaggccgtccccaaggtggtgctgaacaacctg
ttcaagcacacccagatgcagcagagcttcggggtgaacctggtggcgctggtggacggg
gtgccgaagaccctctcctacaaggaggccctccggcactacatcgcccaccagttcgag
gtcgtgacccgcaggacgcgccacgagctggggcgcgcccgcgcgcgggcgcacatcctg
gaggggctgctcatcgcgctctccaacctggacgaggtggtcgagaccatccggcgctcg
cgcaacgtggagaccgcgcgcaggaacctggtgaagcggttcaggctctcggagcgccag
gcgcaggccatcctggacctcaggctgcagcggctgaccgccctcgagcggcgcaaggtg
gagcaggaccaccgcgacctcgtggagaagatcgagtacctggagggcgtgctcgccgac
gagtcgaaggtctacgggatcatcagggaggaactgctcgagataaaggccgcctacgcc
gacgagcgcaggacggccatcaccgcccaggagggggcggagttcgaggtggaggacctc
atcgccgaggaggagatggtgatctccatctcccacgaggggtatctcaagagcgtgccc
ataggctccttccgcaagcagggccggggcggcgtgggggtcgccgggatggagctgaag
gagggcgactacatcgagcacctcttcatcaccaccacccaccactacatgctcttcttc
accaacaggggcaaggtctaccgcctgaaggtccaccagctgccgcggatgggccgggcg
gccaagggccgccacgtcgccaacctgctgccgctcgccccgggcgagcggatagccgcc
gtgatctccacgcgcgacttcgacgaggccgagtacctgctcttcgccacccggcggggc
atggtcaagaagacccccttccgcgactacaacaccccgctcaagaacgaggggattatc
gccataaagctcgccggcggggacgagctcatcgccgtccgccacgcctctgacgaggac
gaggtcgtcttcgtcacccgggacggcaaggggctccgcttccggcagggcgacgtgcgc
cccatgggccgggccaccgccggggtcaaggggatcacgctcaagggcgacgacgccctg
ctctccatggacgtggtctccgacgaggccgccgacctcttcatggtcaccgagaagggc
ttcggcaagcgcaccgccatctccgagttccggccccaggggcgcggggggcagggcgtg
atcgccatgaaggtcaacggcgagcggggcaagatcgccggcgtccaggtggtccgcccc
gggttgcacgagctcgtgatagtctccaatatggggaccaccatcaggatagacagcgac
tcggtcccccggcaggggcgcgccgcgcagggggtgcgggtgatgaacctgcgcgagggc
gactcggtgagcgccctcgccaaggtggtctcctcccgcggcgagccgggggagccggac
gagctggcgctcgatggtataacggaggaggaagcggaacgttccgcgaccgggagccgc
cccgcgccggccgcgaacggcgggaggaagcgtggataa
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