Rubrobacter xylanophilus: Rxyl_0095
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Entry
Rxyl_0095 CDS
T00368
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00300
Lysine biosynthesis
rxy00470
D-Amino acid metabolism
rxy01100
Metabolic pathways
rxy01110
Biosynthesis of secondary metabolites
rxy01120
Microbial metabolism in diverse environments
rxy01230
Biosynthesis of amino acids
Module
rxy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
rxy_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rxyl_0095
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rxyl_0095
Enzymes [BR:
rxy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Rxyl_0095
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ABG03075
UniProt:
Q1AZV3
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Position
complement(99155..99943)
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AA seq
262 aa
AA seq
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MTAFTKMHGAGNDFLLFDWEEVEGADLAELARRACDRHFGVGADGILVPAPSASADLRMV
YRNADGSPSEMCGNGIRCLARYARDRGIVSGDVLAVETGAGVRKVALLEGGRASRVEMGS
PAFGAPVALLGHRFVRVSMGNPHAVAFLPAEEAVERLDLRSVGPRVERDPAFPGRTNVEF
VCVRGPHELRMRIWERGAGETLASGSGSCAAAAAAIREGLARGPVRVILDGGEVEVEWSG
REGDPLYMRGPAEYVCEGRLLL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgttcaccaagatgcacggcgctggcaacgacttcctcctcttcgactgggag
gaggtcgagggcgcggacctcgcggagctcgcccggagggcctgcgaccggcacttcggg
gtcggggccgacggcatcctcgtccccgccccctccgcaagcgccgacctacgcatggtc
taccgcaacgccgacggctcgccctccgagatgtgcggcaacggcatccgctgcctggcc
cgctacgcccgcgacagggggatcgtctccggggacgttctggccgtggagacgggggcg
ggcgtccggaaggtcgcactcctggagggggggcgcgcgagccgggtggagatgggaagc
ccggccttcggcgcgccggtggcgctgctcggccaccgcttcgtgcgggtctccatgggc
aacccgcacgcggtggcctttctccccgcggaggaggcggtggagcggctcgacctgcgc
tccgtggggcccagggtcgagcgcgaccccgccttccccggccgcacgaacgtggagttc
gtctgcgtccgcggcccgcacgagctcaggatgcgcatctgggagcggggggcgggcgag
acgctggcctccggctccgggtcgtgcgccgccgcggcggccgccatccgggaggggctc
gcccgcggaccggtccgggtcatcctggacggcggggaggtggaggtggagtggtccggg
cgcgaaggggacccgctgtacatgaggggcccggcggagtacgtctgcgaggggcggctg
ctgctctag
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