KEGG   Rubrobacter xylanophilus: Rxyl_0230
Entry
Rxyl_0230         CDS       T00368                                 
Name
(GenBank) PHP-like protein
  KO
K02347  DNA polymerase (family X)
Organism
rxy  Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:rxy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rxy03400]
    Rxyl_0230
DNA repair and recombination proteins [BR:rxy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    Rxyl_0230
SSDB
Motif
Pfam: HHH_8 DNA_pol_B_thumb PHP HHH_5 RecR_HhH HHH DNA_pol_B_palm Cdd1 DNA_pol_lambd_f IMS_HHH_1
Other DBs
NCBI-ProteinID: ABG03208
UniProt: Q1AZH0
LinkDB
Position
complement(235008..236717)
AA seq 569 aa
MQNADIARALETIATLLEIRGEEHYRVLAYQRAAESVAASGRPVAELDDPRSLPHVGGTT
ARVIKDLAQNRTPEILAELSAEIPAGLVELTRLPGVGPRTAGRLWRELGVTSVEEVAALG
EGSIAALRGFGKKSEESILRAARAHGARERRMLLDEATAFGERLLEFVRSHPAAERAEIA
GSLRRQKETVGDLDIVAASDDPKALTDAFAAAPFVEEVASHGPTGASVVCAGGVEADLRV
VSPEAFGSLLHHFTGSQAHNVALRERAVKRGLRISEYGLAGAGSDRYEPLRTEEELYARL
GLPYIPPELREDTGEIEAAERGELPDPVGVEDIRGDLHVHTSYSDGKGTIESMAEAAIAL
GYEYLVFCDHSQSLRVANGLSPARLAEKMEAVRRADERYPEIHLLCGAEVDILRDGSLDY
EDAVLAELDFVVASVHTAFRMDEGSMTDRIVRAMHNPHVRTIGHPTGRLLNRRDPYAVDV
SRLIREAAATNTALELNAYPDRLDLSVPHAREAARAGVRLTIDTDAHDERALSFMRFGVS
QARRAWVEKESVINCLPWPEFERYLRRGK
NT seq 1710 nt   +upstreamnt  +downstreamnt
ttgcagaacgcggacatagcgcgcgccctcgagacgatagccaccctgctggagatccgg
ggcgaggagcactacagggtgctcgcctaccagcgggccgccgagtcggtcgccgcctcc
ggcaggccggtggccgagctggacgatccccggagcctcccccacgtcggcggcaccacc
gcccgcgtgataaaagacctcgcgcagaacagaacgccggagatcctggccgagctctcc
gccgagatcccggcggggctggtggagctcacccgcctgccgggcgtggggccgcgcacc
gccggccggctctggcgggagctgggggtgacgagcgtggaggaggtggccgccctcggg
gaggggagcatcgccgcgctcaggggcttcgggaagaagagcgaggagagcatcctcagg
gccgcgcgcgcccacggcgcgcgggagcggcggatgctgctggacgaggccaccgccttc
ggcgagcggctgctggagttcgtccgctcccacccggcggcggagcgggccgagatcgcc
ggctccctgcggcgccagaaggagaccgtgggggacctggacatcgtcgccgcgagcgac
gacccgaaggccctcaccgacgccttcgccgccgcccccttcgtggaggaggtcgcctcc
cacggcccgaccggcgcctccgtcgtctgcgccggcggcgtggaggcggacctgcgggtg
gtctcccccgaggcgttcggctccctgctgcaccacttcaccgggagccaggcgcacaac
gtggcgctgcgcgagcgggcggtgaagagggggctcaggatctccgagtacgggctggcc
ggcgccggctccgaccgctacgagcccctgcggacggaggaggagctctacgcgcggctc
gggctgccgtacatcccgccggagctgcgggaggacaccggcgagatagaggccgccgag
aggggggagctcccggacccggtcggggtcgaagacatccggggcgacctgcacgtccac
accagctactcggacggcaagggcaccatagagagcatggccgaggccgccatcgccctg
ggctacgagtacctcgtcttctgcgaccactcgcagagcctgcgcgtggcgaacggcctc
tcccccgcccggctggcggagaagatggaggccgtccgccgcgccgacgagaggtacccc
gagatccacctgctgtgcggggcggaggtggacatcctgcgcgacggctcgctggactac
gaggacgccgtgctcgccgagctggacttcgtcgtcgcctcggtgcacacggccttccgc
atggacgagggctccatgaccgaccggatcgtacgggccatgcacaacccccacgtccgg
acgatcggccaccccaccggccgcctcctgaaccgccgcgacccctacgcggtggacgtc
tcccgcctcatccgcgaggccgccgccacgaacaccgccctggagctgaacgcctacccg
gaccgcctcgacctctccgtcccccacgcccgcgaggcggcgcgcgccggggtgcggctg
accatcgacaccgacgcccatgacgagcgggcgctctcgttcatgcggttcggcgtgtcc
caggcccgccgcgcctgggtggagaaggagagcgtcatcaactgcctgccctggccggag
ttcgagcggtacctgagaaggggcaagtag

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