Rubrobacter xylanophilus: Rxyl_0503
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Entry
Rxyl_0503 CDS
T00368
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rxyl_0503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_0503
Enzymes [BR:
rxy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Rxyl_0503
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rxyl_0503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
ABG03477
UniProt:
Q1AYQ1
LinkDB
All DBs
Position
537835..538485
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AA seq
216 aa
AA seq
DB search
METLFDAVEGGENREERLAELARQVSVCTRCDLSRSRTNTVFGTGDPYSPLMLVGEGPGE
NEDATGLPFVGRAGKLLDNILAAVNLSREQVYITNIVKCRAAVEENGRLRNRQPRAAEIN
ACNPYLQAQIEAVRPEIILCLGGPAAKTIIDRDFRITRDRGRWYEVGGIRAMATFHPAYI
LRQSGEELARTKRLVWKDIQNVYAEYQKALERRGAS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ttggaaactctctttgacgcggtcgaggggggcgagaaccgggaggagcgcctggccgag
ctggcgcgccaggtctccgtgtgcaccaggtgcgacctctcccgcagccggacgaacacg
gtcttcggcacgggggacccctactcgccgctgatgctggtcggcgaggggccgggggag
aacgaggacgccacggggcttcccttcgtgggccgggcggggaagcttttggacaacatc
ctggcggcggtgaacctgagccgggagcaggtgtacatcaccaacatcgtgaagtgccgg
gccgcggtggaggagaacgggcgcctccgcaaccgccagccccgcgcggccgagataaac
gcctgcaacccctacctgcaggcccagatagaggcggtgaggccggagatcatcctgtgc
ctcggcggccccgcggcgaagacgatcatcgacagggacttcaggatcacgcgcgaccgc
ggccggtggtacgaggtgggcggcatccgggcgatggccaccttccacccggcctacatc
ctccgccagagcggggaggagctggcccgcaccaagcggctggtctggaaggacatccag
aacgtctacgccgagtaccagaaggcgctggagcgccgtggggcctcctag
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