Rubrobacter xylanophilus: Rxyl_0971
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Entry
Rxyl_0971 CDS
T00368
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rxy
Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Rxyl_0971
Enzymes [BR:
rxy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rxyl_0971
Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rxyl_0971
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ABG03938
UniProt:
Q1AXE0
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All DBs
Position
1007988..1008602
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AA seq
204 aa
AA seq
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MSRMFGVFLLGLIACAAAGVFADRAEAETALASWYGPGFAGNPTASGEPYDPSAFTAAHK
TLPLGTQLQVSYNGRSVLVTVNDRGPYVPGRELDLSQAAAEYLGLTQAGVDYVTYNYAGD
VAYAGDVSYGGGSGGYNAYSPTAPQAQQATYGGAGAQQGGVYVVQPGDTLYGIAAELGTT
VEELAAANGIADPNLIVPGQEIRY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggatgttcggggtgtttcttttggggttgatcgcgtgcgcggccgcgggggtc
ttcgcggaccgggccgaggcggagacggcgctggcctcctggtacgggccgggctttgcc
ggcaacccgacggcgagcggcgagccctacgaccccagcgccttcaccgcggcccacaag
acgctgccgctcgggacccagctgcaggtgagctacaacggccgctcggtgctggtgacc
gtcaacgaccgcgggccttacgtgccggggcgggagctggacctctcgcaggcggctgcg
gagtatctgggtctcacccaggccggggtggactacgtcacctacaactacgccggggac
gtggcctacgcgggcgacgtgtcctacggcggcgggtccggcggctacaacgcttactct
cccaccgcgccccaggcgcagcaggcgacctacggcggcgcgggggcgcagcaggggggc
gtctatgtggtgcagcccggggacaccctgtacggcatagccgcggagctcgggaccacg
gtcgaggagctcgcggcagccaacggcatcgccgacccgaacctcatagtgccggggcag
gagatccgctactga
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