Rubrobacter xylanophilus: Rxyl_1138
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Entry
Rxyl_1138 CDS
T00368
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00550
Peptidoglycan biosynthesis
rxy01100
Metabolic pathways
rxy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rxyl_1138
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rxyl_1138
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Rxyl_1138
Enzymes [BR:
rxy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rxyl_1138
Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Rxyl_1138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ABG04104
UniProt:
Q1AWX4
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All DBs
Position
1168361..1170424
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AA seq
687 aa
AA seq
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MLRTPARRTPRKTPAKKRQPTPPMTRGNMQVRVVTLAFLVALVFVVLGGRLWYLQILTGE
TLSLSARATHTKEVKIPAQRGVIYDRDGEVLASNVPGMNVTVIPDMISREKLRELARILE
ADVESVMERYDAAMDPQTGNRYGAMLVKENADKDDVTYIMERTEEFPGVAVNDDWVRRYP
HGSLAAHVLGYTGAITPEELEREPFKGLPNDSVVGKSGVELVYEKALQGEPGVKRYNVDA
LGRVVTVRNADGTRADGRPEVAPELLPPDSKEDPVPGKNLVLTLDLELQRVAERELEAAI
ARARQEGHSGEGGAVVAMDPRNGEILALASRPAFDPQLFVGGISGPEEAETFEYLNSELA
NSPFTNRAIAGAYPGASTFKVFTGLAGFFFGVIDANTTVTDNGGCWRPAGASGCWLSWRQ
TYGTGSTHGTQNYAQAIMDSNDKFFYQVADWIWQRTDDPNALPNFYKRFGFGSLTGIDLP
GETPGRVPTKEWFESYQKEVYGYLERPWGIGDWVNLAIGQGDLLVSPIQMAQAYAAVYNN
GTLVTPHVGKAIRDQDGELVRKIDPKPEGRIEFDPEARRELLEGLSMVTGPDGTAAPAFE
DSELRILGKSGTGERGNKDPVNWFAGWAAGHEDRPLVVVVMVEGGGHSEVTAAPAVRRIL
EAYYGVKTGPTAVEQAAGSYAGSAPSD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggacccccgcgcgcaggacccccaggaagaccccggccaaaaagcgccagccc
accccgccgatgacccgggggaacatgcaggtccgggtggtgacgctggcctttctcgtg
gccctcgtcttcgtggtgctggggggcaggctgtggtacctgcagatcctcaccggcgag
accctctcgctctccgcccgggccacccacaccaaggaggtcaagatcccggcccagcgc
ggcgtcatctacgaccgcgacggggaggtgctcgccagcaacgtccccggcatgaacgtc
accgtgatacctgacatgatctcccgggagaagctccgggagctggcccggatcctcgag
gccgacgtggagtcggtcatggagcgctacgacgcggcgatggacccccagacgggcaac
cgctacggggcgatgctggtcaaggagaacgccgacaaggacgacgtcacctacatcatg
gagcgcaccgaggagttccccggggtggcggtcaacgacgactgggtccgcaggtacccc
cacggctccctcgccgcccacgtcctgggctacaccggcgcgatcacgccggaggagctc
gagcgggagcccttcaagggcctgccgaacgactccgtggtcggcaagagcggggtggag
ctggtctacgagaaggcgctgcagggcgagccgggggtcaagcgctacaacgtggacgcc
ctcgggcgggtggtcaccgtgcgcaacgccgacgggacgcgcgccgacgggaggcccgag
gtggccccggagctgctcccgccggacagcaaggaggacccggtccccggcaagaacctg
gtcctcaccctcgacctggagctgcagcgggtggccgagcgggagctggaggcggcgatc
gcccgcgcccggcaggaggggcactccggggagggcggggcggtcgtggccatggacccc
agaaacggcgagatcctcgcgctcgccagccggcccgccttcgacccccagctcttcgtc
ggcgggatctcgggccccgaggaggcggagaccttcgagtacctcaactcggagctcgcc
aactcccccttcaccaaccgggccatcgccggcgcctaccccggcgcctccaccttcaag
gtgttcactgggctcgcgggcttcttcttcggcgtgatcgacgccaacaccaccgtcacg
gacaacggcggctgctggcgcccggcgggggcctcgggctgctggctctcctggcggcag
acctacgggacgggctccacccacggcacccagaactacgcccaggccatcatggactcc
aacgacaagttcttctaccaggtggccgactggatctggcagcggaccgacgacccgaac
gcgctcccgaacttctacaagcgctttggcttcggctcgctgaccgggatagacctcccg
ggcgagacgccggggcgggtccccaccaaggagtggttcgagtcctaccagaaggaggtc
tacggctacctggagcgcccctggggcatcggcgactgggtgaacctcgccatcgggcag
ggcgatctcttggtcagcccgatccagatggcccaggcctacgccgccgtctacaacaac
ggcacgctggtcaccccgcacgtcggcaaggcgatccgggaccaggacggcgagctggtc
cgcaagatcgaccccaagcccgagggcaggatagagttcgacccggaggcccggcgcgag
ctgctcgagggcctgagcatggtcaccgggccggacggcaccgcggccccggccttcgag
gactccgagctgcgcatcctcggcaagagcggcacgggtgagcggggcaacaaggacccg
gtgaactggttcgccgggtgggccgcgggccatgaggaccgccccctcgtggtggtggtg
atggtggagggcgggggccacagcgaggtcaccgccgccccggcggtccgccgcatcctc
gaggcctactacggcgtgaagacggggcccaccgccgtcgagcaggccgccggctcctac
gcggggagcgccccgagcgactag
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