KEGG   Rubrobacter xylanophilus: Rxyl_1358
Entry
Rxyl_1358         CDS       T00368                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit
  KO
K03090  RNA polymerase sigma-B factor
Organism
rxy  Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:rxy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rxy03021]
    Rxyl_1358
Transcription machinery [BR:rxy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Rxyl_1358
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 KORA HTH_3 HTH_24 HTH_Crp_2 MarR HTH_23 Sigma70_ECF HTH_10 HTH_38 GntR MarR_2 HTH_31 LacI DUF7343 HTH_28 HTH_ParB DUF1492 HTH_VMAP-M9 DUF8167_2nd PhyR_sigma-like
Other DBs
NCBI-ProteinID: ABG04321
UniProt: Q1AWA7
LinkDB
Position
1384972..1385748
AA seq 258 aa
MSGGYPRPDKARTRRLLERYHREGDRQAREQVIQEQLPLAEFLARKFAGRGEPLEDLVQV
ASVGLIKAVDRFDVDRNIEFSTYATPNILGEIKRHFRDKGWAMRVPRGLQELRQAVKEAI
REETVRTGRSPTMDELAERLDTDVESVAEALTLGRAYNTTSLDAPISQDDAEGDTIMDLQ
ADENQPIEGIEDKLLLQEAMRGLREQQREILRLRFNEGKTQTEIAERIGVSQMHVSRLLR
RAIADLRRSLSEMERERH
NT seq 777 nt   +upstreamnt  +downstreamnt
gtgagcggcggctacccgcggcccgacaaggcgcggacccggcggctcctggagcgctac
caccgggagggggaccggcaggccagggagcaggtgatccaggagcagctgccgctcgcc
gagtttctggcgcgcaagttcgccggccgcggggagccgctggaggacctcgtgcaggtg
gcctccgtgggcctcataaaggccgtggaccgcttcgacgtggacaggaacatcgagttc
tccacctacgccacgcccaacatcctgggcgagataaagcgccacttccgggacaagggg
tgggccatgcgggtgccgcgggggctgcaggagctgcgccaggcggtcaaggaggccatc
cgggaggagacggtcaggaccggccgctcgccgacgatggacgagctcgccgagcggctg
gacaccgacgtggagagcgtggccgaggcgctcacgctgggccgggcgtacaacaccacc
agcctggacgcccccataagccaggacgacgccgagggggacaccatcatggacctgcag
gccgacgagaaccagcccatagagggcatagaggacaagctgctgctgcaggaggccatg
cgggggctgcgcgagcagcagcgggagatcctgcggctgcggttcaacgaggggaagacc
cagaccgagatcgccgagcgcatcggggtgagccagatgcacgtctcccgcctgttgcgg
cgggcgatcgccgacctgcggcgctcgctctccgagatggagcgcgagcggcactag

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